RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 RAB31Q13636 194 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 VPS13CQ709C8 3753 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 MBD3L1Q8WWY6 194 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 ARPC1AQ92747 370 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 RASL11BQ9BPW5 248 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 KCNIP2Q9NS61 270 aa20.58■□□□□ 0.88
U2AF1-208ENST00000471250 CORTO00230 105 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 AGPAT2O15120 278 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 HLA-DRB1P01911 266 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 CTRB1P17538 263 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 ZNF726P1Q15940 193 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 CTRB2Q6GPI1 263 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 C19orf35Q6ZS72 473 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 LFNGQ8NES3 379 aa20.57■□□□□ 0.88
U2AF1-208ENST00000471250 RCC1LQ96I51 464 aaKnown RBP20.57■□□□□ 0.88
U2AF1-208ENST00000471250 SOX21Q9Y651 276 aaPredicted RBP20.57■□□□□ 0.88
U2AF1-208ENST00000471250 HBE1P02100 147 aa20.56■□□□□ 0.88
U2AF1-208ENST00000471250 FBP1P09467 338 aa20.56■□□□□ 0.88
U2AF1-208ENST00000471250 BPIFB3P59826 476 aa20.56■□□□□ 0.88
U2AF1-208ENST00000471250 ACOT6Q3I5F7 207 aaPredicted RBP20.56■□□□□ 0.88
U2AF1-208ENST00000471250 ETFRF1Q6IPR1 90 aa20.56■□□□□ 0.88
U2AF1-208ENST00000471250 RPP25LQ8N5L8 163 aaKnown RBP20.56■□□□□ 0.88
U2AF1-208ENST00000471250 OR2T6Q8NHC8 308 aa20.56■□□□□ 0.88
U2AF1-208ENST00000471250 FAM103A1Q9BTL3 118 aaKnown RBP20.56■□□□□ 0.88
U2AF1-208ENST00000471250 IGHV7-81A0A0B4J1V7 117 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 TRAV1-1A0A0B4J248 108 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 BTBD17A6NE02 478 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 CRYGCP07315 174 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 M6PRP20645 277 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 NDPQ00604 133 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 OR10G4Q8NGN3 311 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 OR10G9Q8NGN4 311 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 OR10G7Q8NGN6 311 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 SFT2D1Q8WV19 159 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 MISP3Q96FF7 219 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 RBM14Q96PK6 669 aaKnown RBP20.55■□□□□ 0.88
U2AF1-208ENST00000471250 SSX3Q99909 188 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 WNT10AQ9GZT5 417 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 PXMP4Q9Y6I8 212 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 NAV3Q8IVL0 2385 aa20.55■□□□□ 0.88
U2AF1-208ENST00000471250 RPL29P47914 159 aaKnown RBP20.54■□□□□ 0.88
U2AF1-208ENST00000471250 SRSF3P84103 164 aaKnown RBP20.54■□□□□ 0.88
U2AF1-208ENST00000471250 MIC13Q5XKP0 118 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 DMRT1Q9Y5R6 373 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 IGKV1OR2-108A0A075B7D4 117 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 A0A1B0GV50 99 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 CCL20P78556 96 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 SSX7Q7RTT5 188 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 BPIFCQ8NFQ6 507 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 SLC45A2Q9UMX9 530 aa20.54■□□□□ 0.88
U2AF1-208ENST00000471250 HELZ2Q9BYK8 2649 aaKnown RBP20.53■□□□□ 0.88
U2AF1-208ENST00000471250 ABCA12Q86UK0 2595 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 KRBOX1C9JBD0 128 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 TSPAN9O75954 239 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 YIF1AO95070 293 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 ASPHD1Q5U4P2 390 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 CYB5R2Q6BCY4 276 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 OR1L6Q8NGR2 347 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 FAM210AQ96ND0 272 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 SLC25A33Q9BSK2 321 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 APCP25054 2843 aa20.53■□□□□ 0.88
U2AF1-208ENST00000471250 NAV2Q8IVL1 2488 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 NPIPB5A8MRT5 1133 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 EGR2P11161 476 aaPredicted RBP20.52■□□□□ 0.88
U2AF1-208ENST00000471250 ZP3P21754 424 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 B2MP61769 119 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 C5orf56Q8N8D9 126 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 WFDC11Q8NEX6 87 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 ACY3Q96HD9 319 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 LINC00052Q96N35 136 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 SCRT1Q9BWW7 348 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 ACTR3CQ9C0K3 210 aaPredicted RBP20.52■□□□□ 0.88
U2AF1-208ENST00000471250 MOB4Q9Y3A3 225 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 CENPEQ02224 2701 aa20.52■□□□□ 0.88
U2AF1-208ENST00000471250 CYB5BO43169 146 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 OR10J1P30954 320 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 PRR20EP86478 221 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 PRR20CP86479 221 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 PRR20DP86480 221 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 PRR20BP86481 221 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 PRR20AP86496 221 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 TTC9CQ8N5M4 171 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 STPG3Q8N7X2 389 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 NPIPB3Q92617 1050 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 HSPB9Q9BQS6 159 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 SLC39A9Q9NUM3 307 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 CSMD2Q7Z408 3487 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 CTXND1A0A1B0GTU2 59 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 FSHBP01225 129 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 CD5P06127 495 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 FAM122CQ6P4D5 195 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 LCN15Q6UWW0 184 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 TMEM219Q86XT9 240 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 THAP8Q8NA92 274 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 TMEM231Q9H6L2 316 aa20.51■□□□□ 0.87
U2AF1-208ENST00000471250 MRPL36Q9P0J6 103 aaKnown RBP20.51■□□□□ 0.87
U2AF1-208ENST00000471250 LINC00869P0C866 280 aa20.5■□□□□ 0.87
U2AF1-208ENST00000471250 DEFA4P12838 97 aa20.5■□□□□ 0.87
U2AF1-208ENST00000471250 GUK1Q16774 197 aa20.5■□□□□ 0.87
U2AF1-208ENST00000471250 FOXC2Q99958 501 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms