RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TOMM5Q8N4H5 51 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 LHFPL5Q8TAF8 219 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 RBPMSQ93062 196 aaKnown RBP11.85□□□□□ -0.51
HDAC6-218ENST00000470942 WDR89Q96FK6 387 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-218ENST00000470942 ATP6V0BQ99437 205 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 GAR1Q9NY12 217 aaKnown RBP11.85□□□□□ -0.51
HDAC6-218ENST00000470942 MLXQ9UH92 298 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 KCNIP3Q9Y2W7 256 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 V9GYH0 126 aa11.85□□□□□ -0.51
HDAC6-218ENST00000470942 A8MZ25 164 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 I3L2K1 104 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 ZNF701M0R085 212 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-218ENST00000470942 IGHV3-48P01763 117 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 AKR1C4P17516 323 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 ELLP55199 621 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-218ENST00000470942 AP3S2P59780 193 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 Q6ZRM9 215 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 TMEM190Q8WZ59 177 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 NEURL2Q9BR09 285 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 C20orf24Q9BUV8 137 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
HDAC6-218ENST00000470942 MRPL27Q9P0M9 148 aaKnown RBP11.84□□□□□ -0.51
HDAC6-218ENST00000470942 TENM3Q9P273 2699 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-218ENST00000470942 NDUFA4O00483 81 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 ADMP35318 185 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
HDAC6-218ENST00000470942 KLF9Q13886 244 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-218ENST00000470942 BTNL8Q6UX41 500 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 CCDC190Q86UF4 302 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 TMEM230Q96A57 120 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 GPR146Q96CH1 333 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 TXN2Q99757 166 aa11.83□□□□□ -0.52
HDAC6-218ENST00000470942 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-218ENST00000470942 IGHV3OR16-8A0A075B7F1 116 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 INS-IGF2F8WCM5 200 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 NUPL2O15504 423 aaKnown RBP11.82□□□□□ -0.52
HDAC6-218ENST00000470942 GNG7O60262 68 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 SCAF4O95104 1147 aaKnown RBP11.82□□□□□ -0.52
HDAC6-218ENST00000470942 CTSGP08311 255 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 CD7P09564 240 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 SPCS3P61009 180 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 TMEM187Q14656 261 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 ZNF79Q15937 498 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 SPANXN2Q5MJ10 180 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 RBPMS2Q6ZRY4 209 aaKnown RBP11.82□□□□□ -0.52
HDAC6-218ENST00000470942 TMEM61Q8N0U2 210 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 TRIM63Q969Q1 353 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 RCHY1Q96PM5 261 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 PRR13Q9NZ81 148 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
HDAC6-218ENST00000470942 ZNF207O43670 478 aaKnown RBP11.81□□□□□ -0.52
HDAC6-218ENST00000470942 YIF1AO95070 293 aa11.81□□□□□ -0.52
HDAC6-218ENST00000470942 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-218ENST00000470942 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-218ENST00000470942 DUSP18Q8NEJ0 188 aa11.81□□□□□ -0.52
HDAC6-218ENST00000470942 GALNT14Q96FL9 552 aa11.81□□□□□ -0.52
HDAC6-218ENST00000470942 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
HDAC6-218ENST00000470942 STAB2Q8WWQ8 2551 aa11.81□□□□□ -0.52
HDAC6-218ENST00000470942 TRAV25A0A0B4J276 109 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 RNASE2P10153 161 aaKnown RBP11.8□□□□□ -0.52
HDAC6-218ENST00000470942 ANXA3P12429 323 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 NPBWR1P48145 328 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 SLC16A13Q7RTY0 426 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 TMED4Q7Z7H5 227 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 OR52E5Q8NH55 327 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
HDAC6-218ENST00000470942 HEYLQ9NQ87 328 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-218ENST00000470942 K7EMT4 169 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 CORTO00230 105 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 NXPH3O95157 252 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 SULT1A3P0DMM9 295 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 SULT1A4P0DMN0 295 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 INPP1P49441 399 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 SUPT4H1P63272 117 aaKnown RBP11.79□□□□□ -0.52
HDAC6-218ENST00000470942 HAGHQ16775 308 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 ANKRD55Q3KP44 614 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 WFDC10AQ9H1F0 79 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 SRD5A3Q9H8P0 318 aa11.79□□□□□ -0.52
HDAC6-218ENST00000470942 HUWE1Q7Z6Z7 4374 aaKnown RBP11.79□□□□□ -0.52
HDAC6-218ENST00000470942 C15orf62A8K5M9 175 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 OPRK1P41145 380 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 SRPXP78539 464 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 AARDQ4LEZ3 155 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 LAMTOR1Q6IAA8 161 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 LYZL2Q7Z4W2 148 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 LGI3Q8N145 548 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 SRRQ9GZT4 340 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 NBEAL2Q6ZNJ1 2754 aa11.78□□□□□ -0.52
HDAC6-218ENST00000470942 A0A0B4J2A0 478 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms