RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 C19orf84I3L1E1 186 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 IFNA10P01566 189 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 LGALS1P09382 135 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 SERPINB1P30740 379 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 TCTAP57738 103 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H4AP62805 103 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 HBA1P69905 142 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 RPL18Q07020 188 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 TSNQ15631 228 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 PABPC1L2AQ5JQF8 200 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 C3orf33Q6P1S2 294 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 RPL22L1Q6P5R6 122 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 GRINAQ7Z429 371 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 SLC35E3Q7Z769 313 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 PHF13Q86YI8 300 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 SMIM20Q8N5G0 67 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 TEX47Q8TBZ9 253 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 RASSF5Q8WWW0 418 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 ACOT12Q8WYK0 555 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 MRPS24Q96EL2 167 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 CCDC90BQ9GZT6 254 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 MIXL1Q9H2W2 232 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 C11orf68Q9H3H3 251 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 MRPL40Q9NQ50 206 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 C8orf4Q9NR00 106 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 BATF3Q9NR55 127 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 LYRM2Q9NU23 88 aaPredicted RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 IL36BQ9NZH7 164 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 PRNDQ9UKY0 176 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 PAIP2BQ9ULR5 123 aaKnown RBP1.56□□□□□ -2.16
BRCA2-202ENST00000470094 UFC1Q9Y3C8 167 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 TONSLQ96HA7 1378 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 FHAD1B1AJZ9 1412 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 FMN1Q68DA7 1419 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 MYH2Q9UKX2 1941 aa1.56□□□□□ -2.16
BRCA2-202ENST00000470094 ADGBQ8N7X0 1667 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TRAV9-1A0A075B6T8 112 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TRAV38-1A0A0B4J264 116 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TRAV41A0A0B4J266 112 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TRGV4A0A0C4DH28 118 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 GNG14A0A1W2PPG7 69 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 CREBL2O60519 120 aaPredicted RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BOP23527 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HLA-DMBP28068 263 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 ERP29P30040 261 aaKnown RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BBP33778 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 RPL28P46779 137 aaKnown RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BDP58876 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 DEFA1P59665 94 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BCP62807 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HES1Q14469 280 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST2H2BEQ16778 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 Q6Q795 121 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 LYZL1Q6UWQ5 148 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 ZNF705AQ6ZN79 300 aaPredicted RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 OR4X2Q8NGF9 303 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 OR51T1Q8NGJ9 327 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BHQ93079 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BNQ99877 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HIST1H2BMQ99879 126 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 DERL1Q9BUN8 251 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 C6orf62Q9GZU0 229 aaPredicted RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 CHST6Q9GZX3 395 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TVP23BQ9NYZ1 205 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TP73-AS1Q9UF72 201 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 NAT8Q9UHE5 227 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 HHLA3Q9XRX5 114 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 UTP11Q9Y3A2 253 aaKnown RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 TIMM9Q9Y5J7 89 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 PTPRSQ13332 1948 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 DOCK6Q96HP0 2047 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 IBTKQ9P2D0 1353 aaPredicted RBP1.55□□□□□ -2.16
BRCA2-202ENST00000470094 SLIT2O94813 1529 aa1.55□□□□□ -2.16
BRCA2-202ENST00000470094 IGHV3-64A0A075B6Q5 118 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 TRAV7A0A075B6U4 112 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 FABP5P3A8MUU1 101 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 MIF4GDA9UHW6 222 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 LY6LH3BQJ8 138 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 J3QRK9 145 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 GPR31O00270 319 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 HMGB3O15347 200 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 MFSD11O43934 449 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 OR2J2O76002 312 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 IFNA14P01570 189 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 CSRP1P21291 193 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 RPS4Y1P22090 263 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 PSMB8P28062 276 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 PSMD8P48556 350 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 EVX1P49640 407 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 TPI1P60174 286 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 ZNF90Q03938 601 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 DEFB115Q30KQ5 88 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 ZNF791Q3KP31 576 aaPredicted RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 TMEM78Q5T7P6 136 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 RPP25LQ8N5L8 163 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 H1FXQ92522 213 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 C19orf12Q9NSK7 152 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 ACER3Q9NUN7 267 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms