RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 RPS27AP62979 156 aaKnown RBP3.26□□□□□ -1.89
VPS8-219ENST00000469479 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 GGNBP1Q5YKI7 109 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 ZNF767PQ75MW2 155 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 CEACAM19Q7Z692 300 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 TRPT1Q86TN4 253 aaKnown RBP3.26□□□□□ -1.89
VPS8-219ENST00000469479 CCDC190Q86UF4 302 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 SYS1Q8N2H4 156 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 OR8J1Q8NGP2 316 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 ZNF502Q8TBZ5 544 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 GRAMD2BQ96HH9 432 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 NEDD4LQ96PU5 975 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 NIPSNAP3BQ9BS92 247 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 C20orf24Q9BUV8 137 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 SELENOIQ9C0D9 397 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 Q9H3A6 140 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 ZNF430Q9H8G1 570 aaPredicted RBP3.26□□□□□ -1.89
VPS8-219ENST00000469479 CHMP1AQ9HD42 196 aaPredicted RBP3.26□□□□□ -1.89
VPS8-219ENST00000469479 CELA1Q9UNI1 258 aa3.26□□□□□ -1.89
VPS8-219ENST00000469479 MRPS7Q9Y2R9 242 aaKnown RBP3.26□□□□□ -1.89
VPS8-219ENST00000469479 IGLV11-55A0A075B6I3 123 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 TRBV6-6A0A0A6YYG2 114 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 IGHV7-4-1A0A0J9YVY3 117 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 J3QLW9 94 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 CRTAPO75718 401 aaPredicted RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 BAG2O95816 211 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 CRYZL1O95825 349 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 NAPSAO96009 420 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 IGHV3-23P01764 117 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ZNF735P0CB33 412 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 UBBP0CG47 229 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 VPREB1P12018 145 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 MGMTP16455 207 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ZNF19P17023 458 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 RPL27AP46776 148 aaKnown RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 DEFB131AP59861 70 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 HLA-DRB3P79483 266 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ZNF85Q03923 595 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 GAGE5Q13069 117 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 GAGE6Q13070 117 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 PLA2G7Q13093 441 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ARFRP1Q13795 201 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 USF2Q15853 346 aaPredicted RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 ZNF674Q2M3X9 581 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 KCTD21Q4G0X4 260 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 C12orf73Q69YU5 71 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 SSX9Q7RTT3 188 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 HSD17B13Q7Z5P4 300 aaPredicted RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 DHFR2Q86XF0 187 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ACBD7Q8N6N7 88 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 DUSP18Q8NEJ0 188 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 DGCR14Q96DF8 476 aaKnown RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 C4orf36Q96KX1 117 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 RNF2Q99496 336 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ZNF184Q99676 751 aaPredicted RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 GINS3Q9BRX5 216 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 TMEM70Q9BUB7 260 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 RHPN1-AS1Q9BWJ2 59 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 TMEM231Q9H6L2 316 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 ISG20L2Q9H9L3 353 aaKnown RBP3.25□□□□□ -1.89
VPS8-219ENST00000469479 TAS2R4Q9NYW5 299 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 TP53TG3Q9ULZ0 132 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 PRELID3BQ9Y3B1 194 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 RFNGQ9Y644 331 aa3.25□□□□□ -1.89
VPS8-219ENST00000469479 TRAV14DV4A0A0A6YYC5 116 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 A4D1N5 150 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 MFSD2BA6NFX1 497 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 SRRM4A7MD48 611 aaKnown RBP3.24□□□□□ -1.89
VPS8-219ENST00000469479 ANKRD65E5RJM6 399 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 CHEK1O14757 476 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 SLC22A5O76082 557 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 KBTBD11O94819 623 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
VPS8-219ENST00000469479 SAA1P0DJI8 122 aaPredicted RBP3.24□□□□□ -1.89
VPS8-219ENST00000469479 SRMP19623 302 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 TFPI2P48307 235 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 EIF2B2P49770 351 aaKnown RBP3.24□□□□□ -1.89
VPS8-219ENST00000469479 GBX2P52951 348 aaPredicted RBP3.24□□□□□ -1.89
VPS8-219ENST00000469479 GNGT1P63211 74 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 CLINT1Q14677 625 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 VWC2Q2TAL6 325 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 CCDC58Q4VC31 144 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 TTC23Q5W5X9 447 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 ZNF880Q6PDB4 577 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 GLIPR1L1Q6UWM5 242 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 IDO2Q6ZQW0 420 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 CSNK1G2-AS1Q8NCQ2 148 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 TMEM167AQ8TBQ9 72 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 TRUB1Q8WWH5 349 aaKnown RBP3.24□□□□□ -1.89
VPS8-219ENST00000469479 OR10C1Q96KK4 312 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 OR2D2Q9H210 308 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 OR51E2Q9H255 320 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 C12orf4Q9NQ89 552 aa3.24□□□□□ -1.89
VPS8-219ENST00000469479 IGHV3-35A0A0C4DH35 117 aa3.23□□□□□ -1.89
VPS8-219ENST00000469479 A0A1W2PP11 408 aa3.23□□□□□ -1.89
VPS8-219ENST00000469479 OR2T8A6NH00 312 aa3.23□□□□□ -1.89
VPS8-219ENST00000469479 ZNF705FA8MVS1 300 aaPredicted RBP3.23□□□□□ -1.89
VPS8-219ENST00000469479 H7C423 109 aa3.23□□□□□ -1.89
VPS8-219ENST00000469479 NUPL2O15504 423 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms