RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 CIB3Q96Q77 187 aaPredicted RBP2.73□□□□□ -1.97
TRIM59-202ENST00000468542 CLCC1Q96S66 551 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 TXN2Q99757 166 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 FAM103A1Q9BTL3 118 aaKnown RBP2.73□□□□□ -1.97
TRIM59-202ENST00000468542 MCRIP2Q9BUT9 160 aaKnown RBP2.73□□□□□ -1.97
TRIM59-202ENST00000468542 GPR61Q9BZJ8 451 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 KLK15Q9H2R5 256 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 PLEKHA3Q9HB20 300 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 GPN1Q9HCN4 374 aaPredicted RBP2.73□□□□□ -1.97
TRIM59-202ENST00000468542 RANGRFQ9HD47 186 aaPredicted RBP2.73□□□□□ -1.97
TRIM59-202ENST00000468542 HSPB7Q9UBY9 170 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 CACNG5Q9UF02 275 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 F11RQ9Y624 299 aaKnown RBP2.73□□□□□ -1.97
TRIM59-202ENST00000468542 WSB1Q9Y6I7 421 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 U3KQ87 197 aa2.73□□□□□ -1.97
TRIM59-202ENST00000468542 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 TRAV3A0A0B4J244 114 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 A0A0G2JRQ6 117 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 C13orf42A0A1B0GVH6 325 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 C7orf66A4D0T2 115 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 E7EUB6 86 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 CCL24O00175 119 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ST8SIA3O43173 380 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 SCGB2A1O75556 95 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 MED6O75586 246 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 SCAF4O95104 1147 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 IFNA17P01571 189 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 PF4P02776 101 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 HSPB1P04792 205 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 OR13C7P0DN81 318 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 DEFA4P12838 97 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ANXA7P20073 488 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 SNCAP37840 140 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 HTR2BP41595 481 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 TPPP2P59282 170 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 TAS2R30P59541 319 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 RPP30P78346 268 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 RHOGP84095 191 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 CYCSP99999 105 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ATP5G2Q06055 141 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ZNF616Q08AN1 781 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 DCTN2Q13561 401 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 EXOSC2Q13868 293 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 C15orf32Q32M92 178 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 C2orf83Q53S99 150 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 KHDC1LQ5JSQ8 128 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 KPRPQ5T749 579 aaPredicted RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 C10orf99Q6UWK7 81 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ETV3LQ6ZN32 361 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 Q6ZRM9 215 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 LYZL2Q7Z4W2 148 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 NRARPQ7Z6K4 114 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 LINC00482Q8N8I6 264 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 KLHL30-AS1Q8NEE0 82 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 RNASEH2CQ8TDP1 164 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ASB13Q8WXK3 278 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 CACNG8Q8WXS5 425 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 EEF1AKMT3Q96AZ1 226 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 GPR146Q96CH1 333 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 RBMXL1Q96E39 390 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 BSCL2Q96G97 398 aaPredicted RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 RCC1LQ96I51 464 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 HIPK2Q9H2X6 1198 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ENY2Q9NPA8 101 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 SIGLEC8Q9NYZ4 499 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 PEF1Q9UBV8 284 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 ZMAT5Q9UDW3 170 aaKnown RBP2.72□□□□□ -1.97
TRIM59-202ENST00000468542 LINC00527Q9UJ94 153 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 NSG2Q9Y328 171 aa2.72□□□□□ -1.97
TRIM59-202ENST00000468542 STAB2Q8WWQ8 2551 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 SORL1Q92673 2214 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 TRAV6A0A075B6T7 132 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 LINC00854A0A1B0GVQ3 168 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 RPS10-NUDT3A0A1W2PQS6 291 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 HMX3A6NHT5 357 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 A8MWP6 167 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 NUDT19A8MXV4 375 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 FNDC10F2Z333 226 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 INMT-MINDY4F8WBC2 141 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 LINC01619G3V211 115 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 I3L2K1 104 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 K7EIM0 57 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 LGALS9O00182 355 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 SYNGR2O43760 224 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 TSC22D2O75157 780 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 RNASE2P10153 161 aaKnown RBP2.71□□□□□ -1.98
TRIM59-202ENST00000468542 SLC25A4P12235 298 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 HOXD3P31249 432 aaPredicted RBP2.71□□□□□ -1.98
TRIM59-202ENST00000468542 NPBWR1P48145 328 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 HOXA1P49639 335 aaPredicted RBP2.71□□□□□ -1.98
TRIM59-202ENST00000468542 ELLP55199 621 aaPredicted RBP2.71□□□□□ -1.98
TRIM59-202ENST00000468542 SRSF4Q08170 494 aaKnown RBP2.71□□□□□ -1.98
TRIM59-202ENST00000468542 IL15RAQ13261 267 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 KLF5Q13887 457 aaPredicted RBP2.71□□□□□ -1.98
TRIM59-202ENST00000468542 OXA1LQ15070 435 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 TATDN3Q17R31 274 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 RGS21Q2M5E4 152 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 GGNBP1Q5YKI7 109 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 ETFRF1Q6IPR1 90 aa2.71□□□□□ -1.98
TRIM59-202ENST00000468542 GPHB5Q86YW7 130 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms