RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 EDN2P20800 178 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
CLDN11-202ENST00000468358 SRPXP78539 464 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 LGI3Q8N145 548 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 CACNG8Q8WXS5 425 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 IL22RA2Q969J5 263 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
CLDN11-202ENST00000468358 CEBPZOSA8MTT3 80 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 SULT1A3P0DMM9 295 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 SULT1A4P0DMN0 295 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 CCR6P51684 374 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 MFAP4P55083 255 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 SPCS3P61009 180 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 RBMS2Q15434 407 aaKnown RBP13.15□□□□□ -0.3
CLDN11-202ENST00000468358 TMEM128Q5BJH2 165 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 SPSB3Q6PJ21 355 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 CENPSQ8N2Z9 138 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 HEYLQ9NQ87 328 aaPredicted RBP13.15□□□□□ -0.3
CLDN11-202ENST00000468358 GAR1Q9NY12 217 aaKnown RBP13.15□□□□□ -0.3
CLDN11-202ENST00000468358 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
CLDN11-202ENST00000468358 A0A0B4J2A0 478 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 NAP1L6A6NFF2 107 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 CENPXA8MT69 81 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 A8MWP6 167 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 I3L2K1 104 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
CLDN11-202ENST00000468358 CBLN1P23435 193 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 GUCA2BQ16661 112 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
CLDN11-202ENST00000468358 TM4SF20Q53R12 229 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 UNQ9165/PRO28630Q6UXU0 137 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 GTSCR1Q86UQ5 136 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 OR2K2Q8NGT1 345 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 ATP6V0BQ99437 205 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 C20orf24Q9BUV8 137 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
CLDN11-202ENST00000468358 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 TMEM213A2RRL7 107 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 INS-IGF2F8WCM5 200 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 GNG7O60262 68 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 RNASE2P10153 161 aaKnown RBP13.13□□□□□ -0.31
CLDN11-202ENST00000468358 IL7P13232 177 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 UXS1Q8NBZ7 420 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 OR52E5Q8NH55 327 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 SDHCQ99643 169 aaPredicted RBP13.13□□□□□ -0.31
CLDN11-202ENST00000468358 ASCL2Q99929 193 aa13.13□□□□□ -0.31
CLDN11-202ENST00000468358 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
CLDN11-202ENST00000468358 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 F8W735 103 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-202ENST00000468358 CORTO00230 105 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 OPRK1P41145 380 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 SMCO1Q147U7 214 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 DEFB114Q30KQ6 69 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 DUSP18Q8NEJ0 188 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 OR1S1Q8NH92 325 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 TXN2Q99757 166 aa13.12□□□□□ -0.31
CLDN11-202ENST00000468358 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-202ENST00000468358 NDUFA4O00483 81 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 YIF1AO95070 293 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 ADMP35318 185 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 HTR2BP41595 481 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 NPBWR1P48145 328 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 RELQ04864 619 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-202ENST00000468358 PPP1R1AQ13522 171 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 AARDQ4LEZ3 155 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 C11orf87Q6NUJ2 197 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 BTNL8Q6UX41 500 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 MARC2Q969Z3 335 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
CLDN11-202ENST00000468358 HIPK2Q9H2X6 1198 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 CACFD1Q9UGQ2 172 aa13.11□□□□□ -0.31
CLDN11-202ENST00000468358 ZNF207O43670 478 aaKnown RBP13.1□□□□□ -0.31
CLDN11-202ENST00000468358 NDUFB6O95139 128 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 SFT2D2O95562 160 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 CTSGP08311 255 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 ELLP55199 621 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-202ENST00000468358 ANKRD55Q3KP44 614 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 WDR89Q96FK6 387 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-202ENST00000468358 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
CLDN11-202ENST00000468358 MRPL27Q9P0M9 148 aaKnown RBP13.1□□□□□ -0.31
CLDN11-202ENST00000468358 MLXQ9UH92 298 aa13.1□□□□□ -0.31
CLDN11-202ENST00000468358 DUXBA0A1W2PPF3 345 aa13.09□□□□□ -0.31
CLDN11-202ENST00000468358 FCGR2BP31994 310 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-202ENST00000468358 CD81P60033 236 aa13.09□□□□□ -0.31
CLDN11-202ENST00000468358 TNFRSF9Q07011 255 aa13.09□□□□□ -0.31
CLDN11-202ENST00000468358 Q8N1Y9 231 aa13.09□□□□□ -0.31
CLDN11-202ENST00000468358 SLC24A4Q8NFF2 622 aa13.09□□□□□ -0.31
CLDN11-202ENST00000468358 A0A1B0GU03 582 aa13.08□□□□□ -0.32
CLDN11-202ENST00000468358 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
CLDN11-202ENST00000468358 IFNA10P01566 189 aa13.08□□□□□ -0.32
CLDN11-202ENST00000468358 HOXB5P09067 269 aa13.08□□□□□ -0.32
CLDN11-202ENST00000468358 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms