RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 OR4A16Q8NH70 328 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM222Q9H0R3 208 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 SMAD5-AS1Q9Y6J3 95 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 S4R3C0 116 aa8.45□□□□□ -1.06
COL4A6-205ENST00000468338 CCDC160A6NGH7 325 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 CRYM-AS1A6NIL9 109 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 C2orf70A6NJV1 201 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 A8MWP6 167 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 K7EIM0 57 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 CYB5BO43169 146 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 ATG12O94817 140 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 IGHV3-23P01764 117 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 ARL3P36405 182 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 KLF9Q13886 244 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-205ENST00000468338 IZUMO4Q1ZYL8 232 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 PVRIGQ6DKI7 326 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 SLC25A24Q6NUK1 477 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 OR2K2Q8NGT1 345 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 SCARB1Q8WTV0 552 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 DEDD2Q8WXF8 326 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 GALNT14Q96FL9 552 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 HINT2Q9BX68 163 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 NAA60Q9H7X0 242 aa8.44□□□□□ -1.06
COL4A6-205ENST00000468338 C14orf166Q9Y224 244 aaKnown RBP8.44□□□□□ -1.06
COL4A6-205ENST00000468338 A0A0G2JRQ6 117 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 TEX13DA0A0J9YY54 714 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM213A2RRL7 107 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 A8MZ25 164 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 OR5AC1P0C628 307 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 NHLRC4P0CG21 123 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-205ENST00000468338 C8orf88P0DMB2 117 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 FCGR2BP31994 310 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-205ENST00000468338 S100A5P33763 92 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 DEFB114Q30KQ6 69 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 Q6ZRM9 215 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 Q8N402 240 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 LHFPL5Q8TAF8 219 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 ZNF436Q9C0F3 470 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-205ENST00000468338 SCP2D1Q9UJQ7 156 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM56-RWDD3S4R434 201 aa8.43□□□□□ -1.06
COL4A6-205ENST00000468338 HUWE1Q7Z6Z7 4374 aaKnown RBP8.43□□□□□ -1.06
COL4A6-205ENST00000468338 IZUMO1RA6ND01 250 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 I3L2K1 104 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 ST8SIA3O43173 380 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 TGOLN2O43493 480 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 FOLR2P14207 255 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 CBLN1P23435 193 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 GPR183P32249 361 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 AKR1C2P52895 323 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 ELLP55199 621 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-205ENST00000468338 DHODHQ02127 395 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 TRIM16LQ309B1 348 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 FAM106AQ4KMX7 169 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 C11orf87Q6NUJ2 197 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 SPSB3Q6PJ21 355 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 UNQ9165/PRO28630Q6UXU0 137 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 FAM219AQ8IW50 185 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 SELENOHQ8IZQ5 122 aaKnown RBP8.42□□□□□ -1.06
COL4A6-205ENST00000468338 RBPMSQ93062 196 aaKnown RBP8.42□□□□□ -1.06
COL4A6-205ENST00000468338 BSCL2Q96G97 398 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-205ENST00000468338 ZNF414Q96IQ9 312 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 SCGB3A2Q96PL1 93 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 ZC4H2Q9NQZ6 224 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
COL4A6-205ENST00000468338 ZNF785A8K8V0 405 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
COL4A6-205ENST00000468338 EDN2P20800 178 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
COL4A6-205ENST00000468338 ERHP84090 104 aaKnown RBP8.41□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM187Q14656 261 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 CD300EQ496F6 205 aaPredicted RBP8.41□□□□□ -1.06
COL4A6-205ENST00000468338 PYDC2Q56P42 97 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 LCN12Q6JVE5 192 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 PLET1Q6UQ28 207 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 OR52E5Q8NH55 327 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 RRNAD1Q96FB5 475 aaKnown RBP8.41□□□□□ -1.06
COL4A6-205ENST00000468338 SRRQ9GZT4 340 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 PLEKHA3Q9HB20 300 aa8.41□□□□□ -1.06
COL4A6-205ENST00000468338 TECRQ9NZ01 308 aaKnown RBP8.41□□□□□ -1.06
COL4A6-205ENST00000468338 STAB2Q8WWQ8 2551 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 SCO2A0A1W2PP80 73 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 CTSGP08311 255 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 FRMD6-AS1P0C7T7 363 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 FAUP35544 74 aaKnown RBP8.4□□□□□ -1.06
COL4A6-205ENST00000468338 AP3S2P59780 193 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 BSXQ3C1V8 233 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 SGPP2Q8IWX5 399 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 TOMM5Q8N4H5 51 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 MARC2Q969Z3 335 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 TXN2Q99757 166 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 CHRDL1Q9BU40 450 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.4□□□□□ -1.06
COL4A6-205ENST00000468338 MCUBQ9NWR8 336 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 NDUFA13Q9P0J0 144 aa8.4□□□□□ -1.06
COL4A6-205ENST00000468338 IGHV3-21A0A0B4J1V1 117 aa8.39□□□□□ -1.07
COL4A6-205ENST00000468338 ZNF320A2RRD8 509 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms