RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 V9GYH0 126 aa8.7□□□□□ -1.02
CDHR3-205ENST00000468143 CRYM-AS1A6NIL9 109 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 A8MWP6 167 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 B3GALNT1O75752 331 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 CTSGP08311 255 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 AKR1C4P17516 323 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 S100A5P33763 92 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 SNCAP37840 140 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 HOXA1P49639 335 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-205ENST00000468143 MFAP4P55083 255 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 DHODHQ02127 395 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 TMEM268Q5VZI3 342 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 TMEM61Q8N0U2 210 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 DEFB125Q8N687 156 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 TMEM230Q96A57 120 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 GPR146Q96CH1 333 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 RCHY1Q96PM5 261 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 SLC2A8Q9NY64 477 aa8.69□□□□□ -1.02
CDHR3-205ENST00000468143 A8MZ25 164 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 NXPH3O95157 252 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 C8orf88P0DMB2 117 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 KLF9Q13886 244 aaPredicted RBP8.68□□□□□ -1.02
CDHR3-205ENST00000468143 ZNF79Q15937 498 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 MLANAQ16655 118 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 SPSB3Q6PJ21 355 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 TOMM5Q8N4H5 51 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 ZNF114Q8NC26 417 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 TMEM190Q8WZ59 177 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
CDHR3-205ENST00000468143 ZMAT4Q9H898 229 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 ENY2Q9NPA8 101 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 MRPL27Q9P0M9 148 aaKnown RBP8.68□□□□□ -1.02
CDHR3-205ENST00000468143 KCNIP3Q9Y2W7 256 aa8.68□□□□□ -1.02
CDHR3-205ENST00000468143 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 NDUFA4O00483 81 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 NUPL2O15504 423 aaKnown RBP8.67□□□□□ -1.02
CDHR3-205ENST00000468143 YIF1AO95070 293 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 RNASE2P10153 161 aaKnown RBP8.67□□□□□ -1.02
CDHR3-205ENST00000468143 ELLP55199 621 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-205ENST00000468143 TMEM187Q14656 261 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 HAGHQ16775 308 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 RBPMS2Q6ZRY4 209 aaKnown RBP8.67□□□□□ -1.02
CDHR3-205ENST00000468143 CCDC190Q86UF4 302 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 OR52B4Q8NGK2 314 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 TRIM63Q969Q1 353 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 MARC2Q969Z3 335 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 ZNF414Q96IQ9 312 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 SCGB3A2Q96PL1 93 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 TM2D3Q9BRN9 247 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.67□□□□□ -1.02
CDHR3-205ENST00000468143 CACNG5Q9UF02 275 aa8.67□□□□□ -1.02
CDHR3-205ENST00000468143 SORL1Q92673 2214 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 IGHV3-49A0A0A0MS15 119 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 INS-IGF2F8WCM5 200 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 GNG7O60262 68 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
CDHR3-205ENST00000468143 SUB1P53999 127 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDHR3-205ENST00000468143 SPCS3P61009 180 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 SUPT4H1P63272 117 aaKnown RBP8.66□□□□□ -1.02
CDHR3-205ENST00000468143 TMED4Q7Z7H5 227 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 FAM219AQ8IW50 185 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 TXN2Q99757 166 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 SRD5A3Q9H8P0 318 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 DAZ1Q9NQZ3 744 aaKnown RBP8.66□□□□□ -1.02
CDHR3-205ENST00000468143 GAR1Q9NY12 217 aaKnown RBP8.66□□□□□ -1.02
CDHR3-205ENST00000468143 TMEM56-RWDD3S4R434 201 aa8.66□□□□□ -1.02
CDHR3-205ENST00000468143 IGHV3OR16-13A0A075B7E8 117 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 IGHV3-74A0A0B4J1X5 117 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 CEBPZOSA8MTT3 80 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 K7EMT4 169 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 ZNF701M0R085 212 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 AP3S2P59780 193 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 RELQ04864 619 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 SLC16A13Q7RTY0 426 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 LYZL2Q7Z4W2 148 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 DUSP18Q8NEJ0 188 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 GALNT14Q96FL9 552 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 RETNQ9HD89 108 aa8.65□□□□□ -1.02
CDHR3-205ENST00000468143 HEYLQ9NQ87 328 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
CDHR3-205ENST00000468143 TRAV25A0A0B4J276 109 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 TMEM50AO95807 157 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-205ENST00000468143 OPRK1P41145 380 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 NPBWR1P48145 328 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 BAK1Q16611 211 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 AARDQ4LEZ3 155 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 SPANXN2Q5MJ10 180 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 PVRIGQ6DKI7 326 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 LINC00322Q6ZN03 302 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-205ENST00000468143 OR52E5Q8NH55 327 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 RHPN1-AS1Q9BWJ2 59 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 SRRQ9GZT4 340 aa8.64□□□□□ -1.03
CDHR3-205ENST00000468143 FNDC4Q9H6D8 234 aaPredicted RBP8.64□□□□□ -1.03
CDHR3-205ENST00000468143 UBQLN2Q9UHD9 624 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms