RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ARRDC1Q8N5I2 433 aa13.05□□□□□ -0.32
COL7A1-206ENST00000466591 ZFAND1Q8TCF1 268 aa13.05□□□□□ -0.32
COL7A1-206ENST00000466591 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
COL7A1-206ENST00000466591 DYNC2H1Q8NCM8 4307 aaKnown RBP13.04□□□□□ -0.32
COL7A1-206ENST00000466591 IGHV7-4-1A0A0J9YVY3 117 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 A0A0J9YWU9 116 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 CTSGP08311 255 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
COL7A1-206ENST00000466591 GALNT14Q96FL9 552 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 RNF2Q99496 336 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 KLK11Q9UBX7 282 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 TP53TG1Q9Y2A0 90 aa13.04□□□□□ -0.32
COL7A1-206ENST00000466591 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 C3orf85A0A1B0GTC6 90 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 DNASE2O00115 360 aaPredicted RBP13.03□□□□□ -0.32
COL7A1-206ENST00000466591 CORTO00230 105 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 CD3DP04234 171 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 TBPP20226 339 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 TAS2R19P59542 299 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 LYG2Q86SG7 212 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 ZNF114Q8NC26 417 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 OR52I2Q8NH67 350 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 NXF2Q9GZY0 626 aaKnown RBP13.03□□□□□ -0.32
COL7A1-206ENST00000466591 TMEM231Q9H6L2 316 aa13.03□□□□□ -0.32
COL7A1-206ENST00000466591 C14orf166Q9Y224 244 aaKnown RBP13.03□□□□□ -0.32
COL7A1-206ENST00000466591 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 NUPR2A6NF83 97 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 F8W735 103 aaPredicted RBP13.02□□□□□ -0.33
COL7A1-206ENST00000466591 I3L2K1 104 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 ST8SIA3O43173 380 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 RAB3DO95716 219 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 IGKV1-39P01597 117 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 IGKV1D-39P04432 117 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 RND3P61587 244 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 IZUMO4Q1ZYL8 232 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 ODF3L2Q3SX64 289 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 GPR107Q5VW38 600 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 APRG1Q8IVJ8 170 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 KIR2DL5AQ8N109 375 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
COL7A1-206ENST00000466591 CHEK1O14757 476 aa13.01□□□□□ -0.33
COL7A1-206ENST00000466591 CD5P06127 495 aa13.01□□□□□ -0.33
COL7A1-206ENST00000466591 OPRK1P41145 380 aa13.01□□□□□ -0.33
COL7A1-206ENST00000466591 TCF24Q7RTU0 167 aa13.01□□□□□ -0.33
COL7A1-206ENST00000466591 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
COL7A1-206ENST00000466591 TP53RKQ96S44 253 aa13.01□□□□□ -0.33
COL7A1-206ENST00000466591 TEX13DA0A0J9YY54 714 aaPredicted RBP13□□□□□ -0.33
COL7A1-206ENST00000466591 FCGR2BP31994 310 aaPredicted RBP13□□□□□ -0.33
COL7A1-206ENST00000466591 SP6Q3SY56 376 aa13□□□□□ -0.33
COL7A1-206ENST00000466591 GPR141Q7Z602 305 aa13□□□□□ -0.33
COL7A1-206ENST00000466591 MTFP1Q9UDX5 166 aa13□□□□□ -0.33
COL7A1-206ENST00000466591 KLK5Q9Y337 293 aaPredicted RBP13□□□□□ -0.33
COL7A1-206ENST00000466591 IGHV3-66A0A0C4DH42 116 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 DISC1C4P0D8 188 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 B3GALNT1O75752 331 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 GABARAPO95166 117 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 LY6G6CO95867 125 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 ETV6P41212 452 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 STEAP1BQ6NZ63 245 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 ZNF600Q6ZNG1 722 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 TMEM229BQ8NBD8 167 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 OR13C8Q8NGS7 320 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 TERB2Q8NHR7 220 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 TMEM230Q96A57 120 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 OR10C1Q96KK4 312 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 NAA50Q9GZZ1 169 aaKnown RBP12.99□□□□□ -0.33
COL7A1-206ENST00000466591 MAP6D1Q9H9H5 199 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
COL7A1-206ENST00000466591 PUS1Q9Y606 427 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL7A1-206ENST00000466591 RYR2Q92736 4967 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 A0A1W2PS18 150 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 IGKV1-5P01602 117 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 TNFRSF9Q07011 255 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 MEF2DQ14814 521 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 TOMM20LQ6UXN7 152 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 MARCH1Q8TCQ1 289 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 RNF183Q96D59 192 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 METTL26Q96S19 204 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 CSTL1Q9H114 145 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 STARD9Q9P2P6 4700 aa12.98□□□□□ -0.33
COL7A1-206ENST00000466591 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
COL7A1-206ENST00000466591 GABARAPH6UMI1 98 aa12.97□□□□□ -0.33
COL7A1-206ENST00000466591 NPPCP23582 126 aa12.97□□□□□ -0.33
COL7A1-206ENST00000466591 MRPS10P82664 201 aaKnown RBP12.97□□□□□ -0.33
COL7A1-206ENST00000466591 CTF1Q16619 201 aa12.97□□□□□ -0.33
COL7A1-206ENST00000466591 LHFPL1Q86WI0 220 aa12.97□□□□□ -0.33
COL7A1-206ENST00000466591 ST8SIA2Q92186 375 aa12.97□□□□□ -0.33
COL7A1-206ENST00000466591 HEYLQ9NQ87 328 aaPredicted RBP12.97□□□□□ -0.33
COL7A1-206ENST00000466591 SACSQ9NZJ4 4579 aa12.96□□□□□ -0.33
COL7A1-206ENST00000466591 A0A0B4J293 547 aa12.96□□□□□ -0.33
COL7A1-206ENST00000466591 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.33
COL7A1-206ENST00000466591 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.33
COL7A1-206ENST00000466591 IL18Q14116 193 aa12.96□□□□□ -0.33
COL7A1-206ENST00000466591 ZNF124Q15973 351 aa12.96□□□□□ -0.33
COL7A1-206ENST00000466591 OR4D10Q8NGI6 311 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms