RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 HERC1Q15751 4861 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 RRASP10301 218 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 CXCL3P19876 107 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 NKX2-5P52952 324 aaPredicted RBP10.65□□□□□ -0.7
CXCR4-203ENST00000466288 TCTAP57738 103 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 TSPAN5P62079 268 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 UNQ9165/PRO28630Q6UXU0 137 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 LHFPL1Q86WI0 220 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 C12orf45Q8N5I9 185 aaPredicted RBP10.65□□□□□ -0.7
CXCR4-203ENST00000466288 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 CMSS1Q9BQ75 279 aaKnown RBP10.65□□□□□ -0.7
CXCR4-203ENST00000466288 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 ZNF257Q9Y2Q1 563 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 S4R3C0 116 aa10.65□□□□□ -0.7
CXCR4-203ENST00000466288 MUC4Q99102 2169 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 CRYZL1O95825 349 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 IFNA4P05014 189 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 FCGR2BP31994 310 aaPredicted RBP10.64□□□□□ -0.71
CXCR4-203ENST00000466288 DHODHQ02127 395 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 FGL1Q08830 312 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 TMEM128Q5BJH2 165 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 SLC38A6Q8IZM9 456 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 C11orf45Q8TAV5 145 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 MARC2Q969Z3 335 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
CXCR4-203ENST00000466288 MAP6D1Q9H9H5 199 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 C12orf4Q9NQ89 552 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 FBXL17Q9UF56 701 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 APLNQ9ULZ1 77 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 GPR132Q9UNW8 380 aa10.64□□□□□ -0.71
CXCR4-203ENST00000466288 HMSDA8MTL9 139 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 TEX22C9J3V5 150 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 ACTL6BO94805 426 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 PMP2P02689 132 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
CXCR4-203ENST00000466288 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
CXCR4-203ENST00000466288 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 ZNF585BQ52M93 769 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 DHRS11Q6UWP2 260 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 OR2T35Q8NGX2 323 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 MITD1Q8WV92 249 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
CXCR4-203ENST00000466288 ANXA10Q9UJ72 324 aa10.63□□□□□ -0.71
CXCR4-203ENST00000466288 TRDCB7Z8K6 153 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 SLC22A5O76082 557 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 S1PR2O95136 353 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 CTXN2P0C2S0 81 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 ARPC4P59998 168 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 CYCSP99999 105 aaKnown RBP10.62□□□□□ -0.71
CXCR4-203ENST00000466288 IFITM2Q01629 132 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 DHRS2Q13268 280 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 ZNF767PQ75MW2 155 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 TMED4Q7Z7H5 227 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 MMD2Q8IY49 270 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 C9orf62Q8N4C0 152 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 OSR1Q8TAX0 266 aaPredicted RBP10.62□□□□□ -0.71
CXCR4-203ENST00000466288 C5orf66Q9H5L9 145 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 LRP1BQ9NZR2 4599 aa10.62□□□□□ -0.71
CXCR4-203ENST00000466288 C9orf170A2RU37 121 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 LINC00473A8K010 186 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 NPIPB5A8MRT5 1133 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 E7EUB6 86 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 TSPAN4O14817 238 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 FCGR3AP08637 254 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 DUTP33316 252 aaKnown RBP10.61□□□□□ -0.71
CXCR4-203ENST00000466288 KLK9Q2XQG4 91 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 OR4A4PQ8NGN8 299 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 GALNT14Q96FL9 552 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 C11orf68Q9H3H3 251 aaKnown RBP10.61□□□□□ -0.71
CXCR4-203ENST00000466288 EHFQ9NZC4 300 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 KLK9Q9UKQ9 250 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 CRYGCP07315 174 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 IL6RP08887 468 aaPredicted RBP10.61□□□□□ -0.71
CXCR4-203ENST00000466288 UCP3P55916 312 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 IGSF11Q5DX21 431 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 LAMTOR1Q6IAA8 161 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 EEF1AKMT3Q96AZ1 226 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 ADTRPQ96IZ2 230 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 RARRES2Q99969 163 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 C14orf166Q9Y224 244 aaKnown RBP10.61□□□□□ -0.71
CXCR4-203ENST00000466288 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
CXCR4-203ENST00000466288 TRBV6-7A0A0A0MS04 114 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 PIGBOS1A0A0B4J2F0 54 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 A0A1B0GW64 132 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 IGLL5B9A064 214 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 BET1O15155 118 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 CLEC3BP05452 202 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 CTSDP07339 412 aaPredicted RBP10.6□□□□□ -0.71
CXCR4-203ENST00000466288 ELLP55199 621 aaPredicted RBP10.6□□□□□ -0.71
CXCR4-203ENST00000466288 AADACL3Q5VUY0 350 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 COQ8AQ8NI60 647 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 MARCH1Q8TCQ1 289 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 CABLES2Q9BTV7 478 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 SLC2A9Q9NRM0 540 aa10.6□□□□□ -0.71
CXCR4-203ENST00000466288 MFSD2BA6NFX1 497 aa10.59□□□□□ -0.71
CXCR4-203ENST00000466288 SFT2D2O95562 160 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms