RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NPY1RP25929 384 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 MAS1LP35410 378 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 ARL16Q0P5N6 197 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 TPTE2P1Q5T6R2 138 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 MINOS1Q5TGZ0 78 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 CENPVQ7Z7K6 275 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-215ENST00000465457 THNSL2Q86YJ6 484 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 Q8N7P7 452 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 SLC24A4Q8NFF2 622 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 OR1L8Q8NGR8 309 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 DPM3Q9P2X0 92 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 FBXO7Q9Y3I1 522 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 MINOS1-NBL1R4GNA1 71 aa11.02□□□□□ -0.65
HDAC6-215ENST00000465457 UBE2L5PA0A1B0GUS4 154 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 TSPAN9O75954 239 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 ARF6P62330 175 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 ZNF616Q08AN1 781 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 ETV3LQ6ZN32 361 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 Q6ZSV7 163 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 ZNF709Q8N972 641 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 FAM213BQ8TBF2 198 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 PBDC1Q9BVG4 233 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 HRH4Q9H3N8 390 aa11.01□□□□□ -0.65
HDAC6-215ENST00000465457 DYNC2H1Q8NCM8 4307 aaKnown RBP11□□□□□ -0.65
HDAC6-215ENST00000465457 SRRM4A7MD48 611 aaKnown RBP11□□□□□ -0.65
HDAC6-215ENST00000465457 IGHV4-59P01825 116 aa11□□□□□ -0.65
HDAC6-215ENST00000465457 CD1BP29016 333 aa11□□□□□ -0.65
HDAC6-215ENST00000465457 MOB3BQ86TA1 216 aa11□□□□□ -0.65
HDAC6-215ENST00000465457 SMDT1Q9H4I9 107 aa11□□□□□ -0.65
HDAC6-215ENST00000465457 AURKAIP1Q9NWT8 199 aaPredicted RBP11□□□□□ -0.65
HDAC6-215ENST00000465457 TBL2Q9Y4P3 447 aaKnown RBP11□□□□□ -0.65
HDAC6-215ENST00000465457 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 TEX50A0A1B0GTY4 177 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 A0A1B0GW64 132 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 IGLV2-23P01705 113 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 IFNA4P05014 189 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 SNCAP37840 140 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 SUB1P53999 127 aaKnown RBP eCLIP10.99□□□□□ -0.65
HDAC6-215ENST00000465457 ERHP84090 104 aaKnown RBP10.99□□□□□ -0.65
HDAC6-215ENST00000465457 RUNX1Q01196 453 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 DIAPH2-AS1Q14236 149 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 HABP2Q14520 560 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-215ENST00000465457 C2orf83Q53S99 150 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 TMEM41BQ5BJD5 291 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 SPINK9Q5DT21 86 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 RBMXL1Q96E39 390 aaKnown RBP10.99□□□□□ -0.65
HDAC6-215ENST00000465457 SIRPDQ9H106 197 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 NDUFA4L2Q9NRX3 87 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 WDR83OSQ9Y284 106 aa10.99□□□□□ -0.65
HDAC6-215ENST00000465457 A0A1W2PPI3 338 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 PRSS46E5RG02 174 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 ACTL6BO94805 426 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 OPN1MWP04001 364 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 H2AFB1P0C5Y9 115 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 OPN1MW2P0DN77 364 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 OPN1MW3P0DN78 364 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 FGF7P21781 194 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 LGALS4P56470 323 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 RAB31Q13636 194 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 PEA15Q15121 130 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 BSXQ3C1V8 233 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 VMO1Q7Z5L0 202 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 HINT2Q9BX68 163 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 SIRT7Q9NRC8 400 aa10.98□□□□□ -0.65
HDAC6-215ENST00000465457 RRHO14718 337 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 SLC25A17O43808 307 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 UBE2E1P51965 193 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 PSG5Q15238 335 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 PRSS8Q16651 343 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 NARS2Q96I59 477 aaKnown RBP10.97□□□□□ -0.65
HDAC6-215ENST00000465457 SRSF8Q9BRL6 282 aaKnown RBP10.97□□□□□ -0.65
HDAC6-215ENST00000465457 RSG1Q9BU20 258 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 NPCDR1Q9BY65 106 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-215ENST00000465457 KIAA1456Q9P272 454 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
HDAC6-215ENST00000465457 TMEM218A2RU14 115 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 TOX4O94842 621 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 CA2P00918 260 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 CRYGBP07316 175 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 HCP5Q6MZN7 132 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 C11orf44Q8N8P7 122 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 BPIFCQ8NFQ6 507 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 RNASEH2CQ8TDP1 164 aaKnown RBP10.96□□□□□ -0.65
HDAC6-215ENST00000465457 SSMEM1Q8WWF3 244 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 CACNG8Q8WXS5 425 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 NPVFQ9HCQ7 196 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 TREM1Q9NP99 234 aa10.96□□□□□ -0.65
HDAC6-215ENST00000465457 RNASEK-C17orf49H0YIS7 233 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 MOSP00540 346 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 CD5P06127 495 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 GPX4P36969 197 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-215ENST00000465457 OPRK1P41145 380 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 ACOT6Q3I5F7 207 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms