RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 RAB26Q9ULW5 256 aa7.94□□□□□ -1.14
COL11A1-207ENST00000465209 SSR3Q9UNL2 185 aa7.94□□□□□ -1.14
COL11A1-207ENST00000465209 TRAV2A0A0B4J234 112 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 ZNF705EA8MWA4 302 aaPredicted RBP7.93□□□□□ -1.14
COL11A1-207ENST00000465209 XRCC3O43542 346 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 MT-CO2P00403 227 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 IGHV3-48P01763 117 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 IFNA4P05014 189 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 C4BPBP20851 252 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 MFAP4P55083 255 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 PRCDQ00LT1 54 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 TMEM187Q14656 261 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 LEMD1Q68G75 181 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 PVRIGQ6DKI7 326 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 TOMM20LQ6UXN7 152 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 TCF24Q7RTU0 167 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 TRPT1Q86TN4 253 aaKnown RBP7.93□□□□□ -1.14
COL11A1-207ENST00000465209 FAM212BQ9NTI7 297 aaPredicted RBP7.93□□□□□ -1.14
COL11A1-207ENST00000465209 FKBP11Q9NYL4 201 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 X6R8D5 127 aa7.93□□□□□ -1.14
COL11A1-207ENST00000465209 LRP1BQ9NZR2 4599 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 IGHV4-28A0A0C4DH34 117 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 IGLL5B9A064 214 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 C11orf94C9JXX5 98 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 GPR31O00270 319 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 SNAPC5O75971 98 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 DFFBO76075 338 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 YIF1AO95070 293 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 DEFB131AP59861 70 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 Q6ZTC4 211 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 MISP3Q96FF7 219 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 TSC22D3Q99576 134 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 VCX3BQ9H321 246 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 DIABLOQ9NR28 239 aa7.92□□□□□ -1.14
COL11A1-207ENST00000465209 ELOA3CA0A087WX78 387 aaPredicted RBP7.91□□□□□ -1.14
COL11A1-207ENST00000465209 A0A1B0GU03 582 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 TMEM127O75204 238 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 PMP2P02689 132 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 CD5P06127 495 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 P0C879 139 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 TGFBR1P36897 503 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 LYSMD2Q8IV50 215 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 CMTM1Q8IZ96 169 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 CSNK1G2-AS1Q8NCQ2 148 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 CMTM3Q96MX0 182 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 IFT46Q9NQC8 304 aa7.91□□□□□ -1.14
COL11A1-207ENST00000465209 PUS1Q9Y606 427 aaKnown RBP eCLIP7.91□□□□□ -1.14
COL11A1-207ENST00000465209 IGHV4-4A0A075B6R2 117 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 IGHV3-66A0A0C4DH42 116 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 LOC100506127A0A0U1RQW1 187 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 INS-IGF2F8WCM5 200 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 K7EQG2 157 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 ST8SIA3O43173 380 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 GNG7O60262 68 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 HLA-DMBP28068 263 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 HRH1P35367 487 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 TAS2R46P59540 309 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 TAS2R20P59543 309 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 PAFAH1B2P68402 229 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 PHLDA2Q53GA4 152 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 UBE2NLQ5JXB2 153 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 ZNF600Q6ZNG1 722 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 LINC00336Q6ZUF6 198 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 TBC1D26Q86UD7 250 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 OR5H2Q8NGV7 314 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 DCANP1Q8TF63 244 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 GINS3Q9BRX5 216 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 MRPL36Q9P0J6 103 aaKnown RBP7.9□□□□□ -1.14
COL11A1-207ENST00000465209 CELA1Q9UNI1 258 aa7.9□□□□□ -1.14
COL11A1-207ENST00000465209 RTL8CO15255 209 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 AMBPP02760 352 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 MIFP14174 115 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 HSPE1P61604 102 aaKnown RBP7.89□□□□□ -1.15
COL11A1-207ENST00000465209 IZUMO4Q1ZYL8 232 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 STHQ8IWL8 128 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 TSPAN14Q8NG11 270 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 MRGPRFQ96AM1 343 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 PINX1Q96BK5 328 aaKnown RBP7.89□□□□□ -1.15
COL11A1-207ENST00000465209 GRAMD2BQ96HH9 432 aa7.89□□□□□ -1.15
COL11A1-207ENST00000465209 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
COL11A1-207ENST00000465209 TRAV10A0A0B4J240 114 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 DNASE2O00115 360 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-207ENST00000465209 TMEM50AO95807 157 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 IGKV1-5P01602 117 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 EIF4EP06730 217 aaKnown RBP7.88□□□□□ -1.15
COL11A1-207ENST00000465209 SPP1P10451 314 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 CRYBB3P26998 211 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 TMEM41BQ5BJD5 291 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 SPINK9Q5DT21 86 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 TMEM69Q5SWH9 247 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 H2BFWTQ7Z2G1 175 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 DUSP18Q8NEJ0 188 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 OR6F1Q8NGZ6 308 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 OR4A16Q8NH70 328 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 GPX8Q8TED1 209 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 RNF126Q9BV68 326 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 SCRT1Q9BWW7 348 aa7.88□□□□□ -1.15
COL11A1-207ENST00000465209 YTHDF1Q9BYJ9 559 aaKnown RBP7.88□□□□□ -1.15
COL11A1-207ENST00000465209 A0A0B4J293 547 aa7.87□□□□□ -1.15
COL11A1-207ENST00000465209 KNCNA6PVL3 124 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms