RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 HIPK2Q9H2X6 1198 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 K7EIM0 57 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 PRAF2O60831 178 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
LIMD1-203ENST00000465039 MED6O75586 246 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 IL5P05113 134 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 MFAP2P55001 183 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 IFITM3Q01628 133 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 EGFEM1PQ0D2K5 195 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 BEAN1Q3B7T3 259 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 C2orf83Q53S99 150 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 SLC25A24Q6NUK1 477 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 OR1S1Q8NH92 325 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
LIMD1-203ENST00000465039 CIB3Q96Q77 187 aaPredicted RBP10.53□□□□□ -0.72
LIMD1-203ENST00000465039 C21orf62Q9NYP8 219 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 SIGLEC8Q9NYZ4 499 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 PRR13Q9NZ81 148 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 U3KQ87 197 aa10.53□□□□□ -0.72
LIMD1-203ENST00000465039 CEBPZOSA8MTT3 80 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 I3L2K1 104 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 LGALS9O00182 355 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 BMPR1BO00238 502 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 RNASE2P10153 161 aaKnown RBP10.52□□□□□ -0.73
LIMD1-203ENST00000465039 GGNBP1Q5YKI7 109 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 GPHB5Q86YW7 130 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 SLC24A4Q8NFF2 622 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 ZNF431Q8TF32 576 aaPredicted RBP10.52□□□□□ -0.73
LIMD1-203ENST00000465039 SCARB1Q8WTV0 552 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 DCUN1D4Q92564 292 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 DLX4Q92988 240 aaPredicted RBP10.52□□□□□ -0.73
LIMD1-203ENST00000465039 ELOVL1Q9BW60 279 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 HEYLQ9NQ87 328 aaPredicted RBP10.52□□□□□ -0.73
LIMD1-203ENST00000465039 PEMTQ9UBM1 199 aa10.52□□□□□ -0.73
LIMD1-203ENST00000465039 TRAV6A0A075B6T7 132 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 RPS10-NUDT3A0A1W2PQS6 291 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 ANKRD34BA5PLL1 514 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 MFSD2BA6NFX1 497 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 A8MWP6 167 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 SEC14L6B5MCN3 397 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 SCGB2A1O75556 95 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 IGLL1P15814 213 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 ARL3P36405 182 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 SLURP1P55000 103 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 PLET1Q6UQ28 207 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 OR9G4Q8NGQ1 327 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 DTD1Q8TEA8 209 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
LIMD1-203ENST00000465039 GPN1Q9HCN4 374 aaPredicted RBP10.51□□□□□ -0.73
LIMD1-203ENST00000465039 SNRPGP15A8MWD9 76 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 G3V4G9 280 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 TGOLN2O43493 480 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 PTTG1O95997 202 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 TRBV12-3P01733 135 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 CLEC3BP05452 202 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 HOXB5P09067 269 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 NPY1RP25929 384 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 NPBWR1P48145 328 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 MFAP4P55083 255 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 DEFA5Q01523 94 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 FAM106AQ4KMX7 169 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 OXLD1Q5BKU9 147 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 CLEC19AQ6UXS0 136 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 NRARPQ7Z6K4 114 aa10.5□□□□□ -0.73
LIMD1-203ENST00000465039 MT-CO2P00403 227 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 SLC25A4P12235 298 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 GPR183P32249 361 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 ELLP55199 621 aaPredicted RBP10.49□□□□□ -0.73
LIMD1-203ENST00000465039 RPP30P78346 268 aaKnown RBP10.49□□□□□ -0.73
LIMD1-203ENST00000465039 ID3Q02535 119 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 SPINK9Q5DT21 86 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 ETFRF1Q6IPR1 90 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 MISP3Q96FF7 219 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
LIMD1-203ENST00000465039 F8W735 103 aaPredicted RBP10.48□□□□□ -0.73
LIMD1-203ENST00000465039 SYNGR2O43760 224 aa10.48□□□□□ -0.73
LIMD1-203ENST00000465039 ADAP1O75689 374 aa10.48□□□□□ -0.73
LIMD1-203ENST00000465039 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
LIMD1-203ENST00000465039 RELQ04864 619 aaPredicted RBP10.48□□□□□ -0.73
LIMD1-203ENST00000465039 DCTN2Q13561 401 aaKnown RBP10.48□□□□□ -0.73
LIMD1-203ENST00000465039 C12orf45Q8N5I9 185 aaPredicted RBP10.48□□□□□ -0.73
LIMD1-203ENST00000465039 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
LIMD1-203ENST00000465039 MARC2Q969Z3 335 aa10.48□□□□□ -0.73
LIMD1-203ENST00000465039 ZNF436Q9C0F3 470 aaPredicted RBP10.48□□□□□ -0.73
LIMD1-203ENST00000465039 RBKSQ9H477 322 aa10.48□□□□□ -0.73
LIMD1-203ENST00000465039 TRAV30A0A087WSZ9 112 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 PPP5D1E7EU14 171 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 INMT-MINDY4F8WBC2 141 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 NDUFA4O00483 81 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
LIMD1-203ENST00000465039 IFNA10P01566 189 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 OPRK1P41145 380 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 NKX2-1P43699 371 aaPredicted RBP10.47□□□□□ -0.73
LIMD1-203ENST00000465039 TAS2R30P59541 319 aa10.47□□□□□ -0.73
LIMD1-203ENST00000465039 IAH1Q2TAA2 248 aaPredicted RBP10.47□□□□□ -0.73
LIMD1-203ENST00000465039 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms