RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 C20orf27Q9GZN8 174 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 FAM96AQ9H5X1 160 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 PRTFDC1Q9NRG1 225 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 VPS29Q9UBQ0 182 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 SOX21Q9Y651 276 aaPredicted RBP0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 TMEM56-RWDD3S4R434 201 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 NCOA1Q15788 1441 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 RIC1Q4ADV7 1423 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 FREM1Q5H8C1 2179 aa0.45□□□□□ -2.34
NUCKS1-202ENST00000464938 TTC21AQ8NDW8 1320 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 MYO3BQ8WXR4 1341 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 IGKV1D-42A0A075B6H8 117 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 TRAV26-2A0A0B4J265 109 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 EXOC1LA0A1B0GW35 172 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 DPRXA6NFQ7 191 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 TTRP02766 147 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 COX6A1P12074 109 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 MIFP14174 115 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 RPS20P60866 119 aaKnown RBP0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 LSM6P62312 80 aaKnown RBP0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 HBA1P69905 142 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 RUNX1Q01196 453 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 PLCXD2Q0VAA5 305 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 HIST2H3PS2Q5TEC6 136 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 LCN15Q6UWW0 184 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 MIR17HGQ75NE6 70 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 ZNF565Q8N9K5 539 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 H1FXQ92522 213 aaKnown RBP0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 SCGB3A1Q96QR1 104 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 MIXL1Q9H2W2 232 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 C11orf68Q9H3H3 251 aaKnown RBP0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 CKLFQ9UBR5 152 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 PKIGQ9Y2B9 76 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 PIK3C2GO75747 1445 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 ADGRB2O60241 1585 aa0.44□□□□□ -2.34
NUCKS1-202ENST00000464938 FAM236DA0A1B0GTK5 79 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 TMEM212A6NML5 194 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 GOLGA6L19H0YKK7 550 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 OR2T1O43869 369 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 IFNA10P01566 189 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 TCRBP04435 133 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 HTR1AP08908 422 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 SMIM10L2AP0DMW4 78 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 SMIM10L2BP0DMW5 78 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 FAM236CP0DP71 79 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 FKBP2P26885 142 aaKnown RBP0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 CDC42P60953 191 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 PDE6HQ13956 83 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 KCNJ8Q15842 424 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 IAH1Q2TAA2 248 aaPredicted RBP0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 KRTAP5-10Q6L8G5 202 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 OR4D11Q8NGI4 311 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 OR4C6Q8NH72 309 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 MCFD2Q8NI22 146 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 TMEM106AQ96A25 262 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 C8orf76Q96K31 380 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 REG4Q9BYZ8 158 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 COMMD5Q9GZQ3 224 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 RNF122Q9H9V4 155 aa0.43□□□□□ -2.34
NUCKS1-202ENST00000464938 HEATR5AQ86XA9 2040 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 ZFYVE9O95405 1425 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 A0A087WUJ7 227 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 LOC110117498A0A087WWA1 95 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 FUOMA2VDF0 154 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 OR4C46A6NHA9 309 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 C2orf70A6NJV1 201 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 SMIM23A6NLE4 172 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 CNIH1O95406 144 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 ZNF682O95780 498 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 HAND1O96004 215 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 TNNC2P02585 160 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 UBBP0CG47 229 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 CRYGAP11844 174 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 IL9P15248 144 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 OMPP47874 163 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 EIF2B2P49770 351 aaKnown RBP0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 MYL6P60660 151 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 SURF2Q15527 256 aaPredicted RBP0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 C12orf74Q32Q52 190 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 TEX36Q5VZQ5 186 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 SPOPLQ6IQ16 392 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 AAED1Q7RTV5 226 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 ANKRD29Q8N6D5 301 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 SIGLECL1Q8N7X8 197 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 C12orf29Q8N999 325 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 AQP3Q92482 292 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 CCDC42Q96M95 316 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 PRAP1Q96NZ9 151 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 TMEM147Q9BVK8 224 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 DCSTAMPQ9H295 470 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 UCK1Q9HA47 277 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 IDI2-AS1Q9NZ38 188 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 HEATR5BQ9P2D3 2071 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 DLG5Q8TDM6 1919 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 TECTAO75443 2155 aa0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 INTS1Q8N201 2190 aaKnown RBP0.42□□□□□ -2.34
NUCKS1-202ENST00000464938 MED1Q15648 1581 aaPredicted RBP0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 DIDO1Q9BTC0 2240 aaKnown RBP0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 TNRC6BQ9UPQ9 1833 aaKnown RBP0.41□□□□□ -2.34
NUCKS1-202ENST00000464938 CCDC144AA2RUR9 1427 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms