RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 PRR20CP86479 221 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PRR20DP86480 221 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PRR20BP86481 221 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PRR20AP86496 221 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 SARAFQ96BY9 339 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 MRAP2Q96G30 205 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 SLC25A33Q9BSK2 321 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 RPP25Q9BUL9 199 aaKnown RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 FAM234AQ9H0X4 552 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 JPT1Q9UK76 154 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 TNRC18O15417 2968 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 AHRRA9YTQ3 701 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 C21orf140B9A014 251 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 SMAD7O15105 426 aaKnown RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 CA1P00915 261 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 GATA2P23769 480 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 TFF2Q03403 129 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 GUSBP1Q15486 140 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 LTC4SQ16873 150 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 LYRM7Q5U5X0 104 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 LINC01545Q5VT33 79 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 SPATA31B1PQ5VZV4 182 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM108Q6UXF1 575 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 S100A7AQ86SG5 101 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 RFESDQ8TAC1 157 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 CDX2Q99626 313 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PHF7Q9BWX1 381 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 THYN1Q9P016 225 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 RABAC1Q9UI14 185 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 KIAA2026Q5HYC2 2103 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 ADAMTS9Q9P2N4 1935 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 DUTP33316 252 aaKnown RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 KIR2DL2P43627 348 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 LGALS7P47929 136 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 RAB9AP51151 201 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 LINC01559Q495D7 138 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 Q6AWC8 147 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 UFSP1Q6NVU6 142 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 WDR82Q6UXN9 313 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 RPRMLQ8N4K4 120 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 OR8A1Q8NGG7 326 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 FGFBP3Q8TAT2 258 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF296Q8WUU4 475 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 NEUROG1Q92886 237 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 PERPQ96FX8 193 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 PGLYRP4Q96LB8 373 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 DUSP23Q9BVJ7 150 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1B0GUT8 65 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 C15orf61A6NNL5 157 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 DEFB108AA8MXU0 73 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 F2RL2O00254 374 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 SNAI2O43623 268 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 APOHP02749 345 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 CELA3BP08861 270 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 CT45A10P0DMU9 189 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 CD46P15529 392 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 GCSHP23434 173 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 MC5RP33032 325 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 NMUP48645 174 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF137PP52743 207 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 SRYQ05066 204 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 FOXF2Q12947 444 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM177Q53S58 311 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 TCTEX1D4Q5JR98 221 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM240Q5SV17 173 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF788Q6ZQV5 615 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 DEFB119Q8N690 84 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 RLN3Q8WXF3 142 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 FMC1Q96HJ9 113 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 VGLL1Q99990 258 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 PRDM6Q9NQX0 595 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF492Q9P255 531 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 SMPXQ9UHP9 88 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 CYSLTR1Q9Y271 337 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 NCOA6Q14686 2063 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV3-43A0A0B4J1X8 118 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM189A5PLL7 270 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 PGPA6NDG6 321 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 GGTLC3B5MD39 225 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 C2CD4DB7Z1M9 353 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 DLL1O00548 723 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 KLF7O75840 302 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV3-43DP0DP04 118 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 FOLR3P41439 243 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 CYB561P49447 251 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 TCTAP57738 103 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 EDDM3AQ14507 147 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 DAZAP2Q15038 168 aaPredicted RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 LGALS9BQ3B8N2 356 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 ABHD17BQ5VST6 288 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 LGALS9CQ6DKI2 356 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 SLC25A48Q6ZT89 311 aaKnown RBP3.19□□□□□ -1.9
CCNL1-204ENST00000464316 Q8N7P7 452 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 PRR7Q8TB68 274 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 BADQ92934 168 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 CXXC4Q9H2H0 198 aa3.19□□□□□ -1.9
CCNL1-204ENST00000464316 SPANXA1Q9NS26 97 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms