RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SCARB1Q8WTV0 552 aa14.55□□□□□ -0.08
LMNB1-204ENST00000463908 TMEM170AQ8WVE7 144 aa14.55□□□□□ -0.08
LMNB1-204ENST00000463908 DLX4Q92988 240 aaPredicted RBP14.55□□□□□ -0.08
LMNB1-204ENST00000463908 PALMDQ9NP74 551 aa14.55□□□□□ -0.08
LMNB1-204ENST00000463908 HEYLQ9NQ87 328 aaPredicted RBP14.55□□□□□ -0.08
LMNB1-204ENST00000463908 I3L2K1 104 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 BMPR1BO00238 502 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 CYB5BO43169 146 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 IFNA21P01568 189 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 OR8U8P0C7N1 319 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 CD33P20138 364 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 ID3Q02535 119 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 CLEC19AQ6UXS0 136 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 UXS1Q8NBZ7 420 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 DCUN1D4Q92564 292 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 EEF1AKMT3Q96AZ1 226 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 CXorf58Q96LI9 332 aa14.54□□□□□ -0.08
LMNB1-204ENST00000463908 PRKDCP78527 4128 aaKnown RBP14.54□□□□□ -0.08
LMNB1-204ENST00000463908 FAM90A26D6RGX4 464 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 PPP5D1E7EU14 171 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 F8W735 103 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-204ENST00000463908 CCSO14618 274 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 CLEC3BP05452 202 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 IGLL1P15814 213 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 HOXD3P31249 432 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-204ENST00000463908 OR4D5Q8NGN0 318 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 DTD1Q8TEA8 209 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 MISP3Q96FF7 219 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 MAGT1Q9H0U3 335 aa14.53□□□□□ -0.08
LMNB1-204ENST00000463908 TRBV7-1A0A0A6YYK4 115 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 MT-CO2P00403 227 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 HTR2BP41595 481 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 SUB1P53999 127 aaKnown RBP eCLIP14.52□□□□□ -0.09
LMNB1-204ENST00000463908 KLF5Q13887 457 aaPredicted RBP14.52□□□□□ -0.09
LMNB1-204ENST00000463908 MLANAQ16655 118 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 C2orf83Q53S99 150 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 OXLD1Q5BKU9 147 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 HIPK2Q9H2X6 1198 aa14.52□□□□□ -0.09
LMNB1-204ENST00000463908 SNRPGP15A8MWD9 76 aa14.51□□□□□ -0.09
LMNB1-204ENST00000463908 PRAF2O60831 178 aa14.51□□□□□ -0.09
LMNB1-204ENST00000463908 PTTG1O95997 202 aa14.51□□□□□ -0.09
LMNB1-204ENST00000463908 IGHV3-48P01763 117 aa14.51□□□□□ -0.09
LMNB1-204ENST00000463908 DCTN2Q13561 401 aaKnown RBP14.51□□□□□ -0.09
LMNB1-204ENST00000463908 IAH1Q2TAA2 248 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-204ENST00000463908 ZBTB8BQ8NAP8 495 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-204ENST00000463908 PINX1Q96BK5 328 aaKnown RBP14.51□□□□□ -0.09
LMNB1-204ENST00000463908 GPN1Q9HCN4 374 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-204ENST00000463908 C21orf62Q9NYP8 219 aa14.51□□□□□ -0.09
LMNB1-204ENST00000463908 G3V4G9 280 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 SYNGR2O43760 224 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 OR2C1O95371 312 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 ZP3P21754 424 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 SAMD5Q5TGI4 173 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 SLC24A4Q8NFF2 622 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 RCC1LQ96I51 464 aaKnown RBP14.5□□□□□ -0.09
LMNB1-204ENST00000463908 FNDC4Q9H6D8 234 aaPredicted RBP14.5□□□□□ -0.09
LMNB1-204ENST00000463908 ZC4H2Q9NQZ6 224 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 U3KQ87 197 aa14.5□□□□□ -0.09
LMNB1-204ENST00000463908 IAPPP10997 89 aa14.49□□□□□ -0.09
LMNB1-204ENST00000463908 GPR183P32249 361 aa14.49□□□□□ -0.09
LMNB1-204ENST00000463908 ARL3P36405 182 aa14.49□□□□□ -0.09
LMNB1-204ENST00000463908 POLR2GP62487 172 aaKnown RBP eCLIP14.49□□□□□ -0.09
LMNB1-204ENST00000463908 FAM209BQ5JX69 171 aa14.49□□□□□ -0.09
LMNB1-204ENST00000463908 MRPL36Q9P0J6 103 aaKnown RBP14.49□□□□□ -0.09
LMNB1-204ENST00000463908 GSKIPQ9P0R6 139 aa14.49□□□□□ -0.09
LMNB1-204ENST00000463908 OR2T8A6NH00 312 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 OVOL1O14753 267 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 GGCTO75223 188 aaKnown RBP14.48□□□□□ -0.09
LMNB1-204ENST00000463908 MED6O75586 246 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 IFNA10P01566 189 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 NPY1RP25929 384 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 NKX2-1P43699 371 aaPredicted RBP14.48□□□□□ -0.09
LMNB1-204ENST00000463908 IL15RAQ13261 267 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 RPEL1Q2QD12 228 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 ZNF414Q96IQ9 312 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 ATP6V0BQ99437 205 aa14.48□□□□□ -0.09
LMNB1-204ENST00000463908 C5orf51A6NDU8 294 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 FAM25EA8MYX2 175 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 WRBO00258 174 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 TMEM50AO95807 157 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 CTSGP08311 255 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 FCGR2BP31994 310 aaPredicted RBP14.47□□□□□ -0.09
LMNB1-204ENST00000463908 ADMP35318 185 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 PAX9P55771 341 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 SYNJ2BPP57105 145 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 IL34Q6ZMJ4 242 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 GPHB5Q86YW7 130 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 C1QL4Q86Z23 238 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 C2orf50Q96LR7 162 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 CHRDL1Q9BU40 450 aa14.47□□□□□ -0.09
LMNB1-204ENST00000463908 C7orf66A4D0T2 115 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 C15orf62A8K5M9 175 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 CORTO00230 105 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 TGOLN2O43493 480 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 MBPP02686 304 aaPredicted RBP14.46□□□□□ -0.09
LMNB1-204ENST00000463908 MFAP4P55083 255 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 ATP5IP56385 69 aaPredicted RBP14.46□□□□□ -0.09
LMNB1-204ENST00000463908 TATDN3Q17R31 274 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 Q56UQ5 140 aa14.46□□□□□ -0.09
LMNB1-204ENST00000463908 ACSM6Q6P461 480 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms