RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 ODF3Q96PU9 254 aa1.04□□□□□ -2.24
USP9X-204ENST00000463829 COMMD5Q9GZQ3 224 aa1.04□□□□□ -2.24
USP9X-204ENST00000463829 FBXL12Q9NXK8 326 aa1.04□□□□□ -2.24
USP9X-204ENST00000463829 EXPH5Q8NEV8 1989 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 TGIF2-C20orf24A0A0A6YYL0 155 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 SULT1A1P50225 295 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 PSME3P61289 254 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 SNRPD2P62316 118 aaKnown RBP1.03□□□□□ -2.24
USP9X-204ENST00000463829 TEX36Q5VZQ5 186 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 LPCAT3Q6P1A2 487 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 OR4C6Q8NH72 309 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 AQP3Q92482 292 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 GINS4Q9BRT9 223 aa1.03□□□□□ -2.24
USP9X-204ENST00000463829 GEMIN2O14893 280 aaKnown RBP1.02□□□□□ -2.25
USP9X-204ENST00000463829 HIST1H1TP22492 207 aaPredicted RBP1.02□□□□□ -2.25
USP9X-204ENST00000463829 UBE2IP63279 158 aaKnown RBP1.02□□□□□ -2.25
USP9X-204ENST00000463829 CTAG1AP78358 180 aa1.02□□□□□ -2.25
USP9X-204ENST00000463829 DEFB115Q30KQ5 88 aa1.02□□□□□ -2.25
USP9X-204ENST00000463829 BPIFA4PQ86YQ2 179 aa1.02□□□□□ -2.25
USP9X-204ENST00000463829 OTUD6BQ8N6M0 293 aa1.02□□□□□ -2.25
USP9X-204ENST00000463829 TP73-AS1Q9UF72 201 aa1.02□□□□□ -2.25
USP9X-204ENST00000463829 RIC1Q4ADV7 1423 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 IGKV1D-42A0A075B6H8 117 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 DPRXA6NFQ7 191 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 SMIM23A6NLE4 172 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 AHSA1O95433 338 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 IFNA10P01566 189 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 IFNA16P05015 189 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 FKBP2P26885 142 aaKnown RBP1.01□□□□□ -2.25
USP9X-204ENST00000463829 MIR17HGQ75NE6 70 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 CLVS1Q8IUQ0 354 aaPredicted RBP1.01□□□□□ -2.25
USP9X-204ENST00000463829 NIPSNAP1Q9BPW8 284 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 SLC50A1Q9BRV3 221 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 TMEM56-RWDD3S4R434 201 aa1.01□□□□□ -2.25
USP9X-204ENST00000463829 COL4A5P29400 1685 aa1□□□□□ -2.25
USP9X-204ENST00000463829 NUP155O75694 1391 aa1□□□□□ -2.25
USP9X-204ENST00000463829 MTUS2Q5JR59 1369 aa1□□□□□ -2.25
USP9X-204ENST00000463829 A0A0D9SG52 128 aa1□□□□□ -2.25
USP9X-204ENST00000463829 FAAHO00519 579 aa1□□□□□ -2.25
USP9X-204ENST00000463829 CTSDP07339 412 aaPredicted RBP1□□□□□ -2.25
USP9X-204ENST00000463829 RPL5P46777 297 aaKnown RBP1□□□□□ -2.25
USP9X-204ENST00000463829 KCNJ8Q15842 424 aa1□□□□□ -2.25
USP9X-204ENST00000463829 IMPG1Q17R60 797 aa1□□□□□ -2.25
USP9X-204ENST00000463829 SPANXN5Q5MJ07 72 aa1□□□□□ -2.25
USP9X-204ENST00000463829 PTRHD1Q6GMV3 140 aaKnown RBP1□□□□□ -2.25
USP9X-204ENST00000463829 SPOPLQ6IQ16 392 aa1□□□□□ -2.25
USP9X-204ENST00000463829 DPPA3Q6W0C5 159 aa1□□□□□ -2.25
USP9X-204ENST00000463829 Q6ZQT0 140 aa1□□□□□ -2.25
USP9X-204ENST00000463829 ANKRD29Q8N6D5 301 aa1□□□□□ -2.25
USP9X-204ENST00000463829 OR4E2Q8NGC2 313 aa1□□□□□ -2.25
USP9X-204ENST00000463829 TERB2Q8NHR7 220 aa1□□□□□ -2.25
USP9X-204ENST00000463829 DNAJC9Q8WXX5 260 aa1□□□□□ -2.25
USP9X-204ENST00000463829 TOMM6Q96B49 74 aa1□□□□□ -2.25
USP9X-204ENST00000463829 PPP1R2P1Q96PQ5 205 aa1□□□□□ -2.25
USP9X-204ENST00000463829 C11orf68Q9H3H3 251 aaKnown RBP1□□□□□ -2.25
USP9X-204ENST00000463829 WRNQ14191 1432 aaPredicted RBP eCLIP0.99□□□□□ -2.25
USP9X-204ENST00000463829 TRAV9-1A0A075B6T8 112 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 EXOC1LA0A1B0GW35 172 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 CHP2O43745 196 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 FADS1O60427 444 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 CRYGAP11844 174 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 COX6A1P12074 109 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 SPI1P17947 270 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 BRS3P32247 399 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 ACOT6Q3I5F7 207 aaPredicted RBP0.99□□□□□ -2.25
USP9X-204ENST00000463829 KHDC3LQ587J8 217 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 PHF13Q86YI8 300 aaPredicted RBP0.99□□□□□ -2.25
USP9X-204ENST00000463829 H1FXQ92522 213 aaKnown RBP0.99□□□□□ -2.25
USP9X-204ENST00000463829 DCUN1D1Q96GG9 259 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 ARL5BQ96KC2 179 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 MRPL57Q9BQC6 102 aaKnown RBP0.99□□□□□ -2.25
USP9X-204ENST00000463829 SLC39A9Q9NUM3 307 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 VPS29Q9UBQ0 182 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 PKIGQ9Y2B9 76 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 NOSIPQ9Y314 301 aaKnown RBP0.99□□□□□ -2.25
USP9X-204ENST00000463829 C22orf24Q9Y442 160 aa0.99□□□□□ -2.25
USP9X-204ENST00000463829 TNRC6BQ9UPQ9 1833 aaKnown RBP0.99□□□□□ -2.25
USP9X-204ENST00000463829 NCOA6Q14686 2063 aaPredicted RBP0.98□□□□□ -2.25
USP9X-204ENST00000463829 A0A087WX48 190 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 PQLC2LA1A4F0 135 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 NIPSNAP2O75323 286 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 ASAH2BP0C7U1 165 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 OR5A1Q8NGJ0 315 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 TSPAN32Q96QS1 320 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 MIXL1Q9H2W2 232 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 MRPL27Q9P0M9 148 aaKnown RBP0.98□□□□□ -2.25
USP9X-204ENST00000463829 ERGIC3Q9Y282 383 aa0.98□□□□□ -2.25
USP9X-204ENST00000463829 EML6Q6ZMW3 1958 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 GOLGA6L19H0YKK7 550 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 CRYZL1O95825 349 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 TCL1BO95988 128 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 SERPINA6P08185 405 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 RPS20P60866 119 aaKnown RBP0.97□□□□□ -2.25
USP9X-204ENST00000463829 RHEBQ15382 184 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 HIST3H2BBQ8N257 126 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 FAM19A2Q8N3H0 131 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 SIGLECL1Q8N7X8 197 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 ULBP3Q9BZM4 244 aa0.97□□□□□ -2.25
USP9X-204ENST00000463829 ECM29Q5VYK3 1845 aa0.96□□□□□ -2.26
USP9X-204ENST00000463829 HECW2Q9P2P5 1572 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms