RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ZNF57Q68EA5 555 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-202ENST00000463440 TOMM5Q8N4H5 51 aa12.26□□□□□ -0.45
COL1A1-202ENST00000463440 TXN2Q99757 166 aa12.26□□□□□ -0.45
COL1A1-202ENST00000463440 TUBA4BQ9H853 241 aa12.26□□□□□ -0.45
COL1A1-202ENST00000463440 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
COL1A1-202ENST00000463440 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
COL1A1-202ENST00000463440 V9GYH0 126 aa12.26□□□□□ -0.45
COL1A1-202ENST00000463440 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 F8W735 103 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-202ENST00000463440 I3L2K1 104 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 NDUFA4O00483 81 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 HOXA1P49639 335 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-202ENST00000463440 SUB1P53999 127 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL1A1-202ENST00000463440 TMEM268Q5VZI3 342 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 SELENOHQ8IZQ5 122 aaKnown RBP12.25□□□□□ -0.45
COL1A1-202ENST00000463440 TMEM190Q8WZ59 177 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
COL1A1-202ENST00000463440 NEURL2Q9BR09 285 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 CHRDL1Q9BU40 450 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-202ENST00000463440 MLXQ9UH92 298 aa12.25□□□□□ -0.45
COL1A1-202ENST00000463440 NUPL2O15504 423 aaKnown RBP12.24□□□□□ -0.45
COL1A1-202ENST00000463440 MT-CO2P00403 227 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 C8orf88P0DMB2 117 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 FCGR2BP31994 310 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-202ENST00000463440 ETV6P41212 452 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 RELQ04864 619 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-202ENST00000463440 KLF9Q13886 244 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-202ENST00000463440 SPANXN2Q5MJ10 180 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 BTNL8Q6UX41 500 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 CCDC190Q86UF4 302 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 LHFPL5Q8TAF8 219 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 IL22RA2Q969J5 263 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 TRIM63Q969Q1 353 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 WDR89Q96FK6 387 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-202ENST00000463440 GALNT14Q96FL9 552 aa12.24□□□□□ -0.45
COL1A1-202ENST00000463440 DAZ1Q9NQZ3 744 aaKnown RBP12.24□□□□□ -0.45
COL1A1-202ENST00000463440 CORTO00230 105 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 CTSGP08311 255 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 AKR1C4P17516 323 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 ADMP35318 185 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 SPCS3P61009 180 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 ZNF79Q15937 498 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 Q6ZRM9 215 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 DEDD2Q8WXF8 326 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 RCHY1Q96PM5 261 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 CACNG5Q9UF02 275 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
COL1A1-202ENST00000463440 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 GNG7O60262 68 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 CD7P09564 240 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 ANXA3P12429 323 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 TMEM187Q14656 261 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 ANKRD55Q3KP44 614 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 AARDQ4LEZ3 155 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 RBPMS2Q6ZRY4 209 aaKnown RBP12.22□□□□□ -0.45
COL1A1-202ENST00000463440 SLC16A13Q7RTY0 426 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 DUSP18Q8NEJ0 188 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 GPR146Q96CH1 333 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 SELENOKQ9Y6D0 94 aa12.22□□□□□ -0.45
COL1A1-202ENST00000463440 K7EMT4 169 aa12.21□□□□□ -0.45
COL1A1-202ENST00000463440 SCAF4O95104 1147 aaKnown RBP12.21□□□□□ -0.45
COL1A1-202ENST00000463440 IGHV3-48P01763 117 aa12.21□□□□□ -0.45
COL1A1-202ENST00000463440 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.45
COL1A1-202ENST00000463440 NPBWR1P48145 328 aa12.21□□□□□ -0.45
COL1A1-202ENST00000463440 SRPXP78539 464 aa12.21□□□□□ -0.45
COL1A1-202ENST00000463440 TM2D3Q9BRN9 247 aa12.21□□□□□ -0.45
COL1A1-202ENST00000463440 PIGBOS1A0A0B4J2F0 54 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 C15orf62A8K5M9 175 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 YIF1AO95070 293 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 SULT1A3P0DMM9 295 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 SULT1A4P0DMN0 295 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 LAMTOR1Q6IAA8 161 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 OR52B4Q8NGK2 314 aa12.2□□□□□ -0.46
COL1A1-202ENST00000463440 SLC25A21Q9BQT8 299 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-202ENST00000463440 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-202ENST00000463440 IGHV3OR16-8A0A075B7F1 116 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 CEBPZOSA8MTT3 80 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 ZNF207O43670 478 aaKnown RBP12.19□□□□□ -0.46
COL1A1-202ENST00000463440 HTR2BP41595 481 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 INPP1P49441 399 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
COL1A1-202ENST00000463440 HAGHQ16775 308 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 LGI3Q8N145 548 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 DEFB125Q8N687 156 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 NDUFA13Q9P0J0 144 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
COL1A1-202ENST00000463440 OPRK1P41145 380 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms