RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
PHACTR4-203ENST00000463428 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
PHACTR4-203ENST00000463428 RANGRFQ9HD47 186 aaPredicted RBP10.79□□□□□ -0.68
PHACTR4-203ENST00000463428 ZNF355PQ9NSJ1 428 aa10.79□□□□□ -0.68
PHACTR4-203ENST00000463428 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 I3L2K1 104 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 K7EIM0 57 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 RLN2P04090 185 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 TPPP2P59282 170 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 RPL23AP62750 156 aaKnown RBP10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 RHOGP84095 191 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 OR4X2Q8NGF9 303 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 FNDC4Q9H6D8 234 aaPredicted RBP10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 FBXL7Q9UJT9 491 aa10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 STRAPQ9Y3F4 350 aaKnown RBP10.78□□□□□ -0.68
PHACTR4-203ENST00000463428 FAM24AA6NFZ4 105 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 FAM223BA6NKX1 122 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 PRSS46E5RG02 174 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 E5RGE8 158 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 L7N2F9 121 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 CCNKO75909 580 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 PVALBP20472 110 aaPredicted RBP10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 P2RY1P47900 373 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 VAMP2P63027 116 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 RPP30P78346 268 aaKnown RBP10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 MLANAQ16655 118 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 TMEM65Q6PI78 240 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 NOXA1Q86UR1 476 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 FAM223AQ8IWN6 122 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 C11orf44Q8N8P7 122 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 OR2T35Q8NGX2 323 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 RNASEH2CQ8TDP1 164 aaKnown RBP10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 MDFIQ99750 246 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 CITED1Q99966 193 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 LYRM2Q9NU23 88 aaPredicted RBP10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 MBD2Q9UBB5 411 aa10.77□□□□□ -0.68
PHACTR4-203ENST00000463428 CYB5BO43169 146 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 PET100P0DJ07 73 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 SLC25A4P12235 298 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 CDX1P47902 265 aaPredicted RBP10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 FGL1Q08830 312 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 ETV3LQ6ZN32 361 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 HAPLN4Q86UW8 402 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 TMEM252Q8N6L7 170 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 MISP3Q96FF7 219 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 USMG5Q96IX5 58 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 UBE2E2Q96LR5 201 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 CITED2Q99967 270 aaPredicted RBP10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 THYN1Q9P016 225 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 TENM1Q9UKZ4 2725 aa10.76□□□□□ -0.69
PHACTR4-203ENST00000463428 IGSF23A1L1A6 192 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 MFSD2BA6NFX1 497 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 SMLR1H3BR10 107 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 CORTO00230 105 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 MT-CO2P00403 227 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 OR8U8P0C7N1 319 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 METTL15P1P0C7V9 234 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 RAB11AP62491 216 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 ATP5G2Q06055 141 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 ARL16Q0P5N6 197 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 C15orf32Q32M92 178 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 TCTE3Q8IZS6 198 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 VN1R17PQ8TDU5 208 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 SCARB1Q8WTV0 552 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 NEURL2Q9BR09 285 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 ZNF747Q9BV97 191 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 GNB4Q9HAV0 340 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 IGHV3-21A0A0B4J1V1 117 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 A0A0G2JLM5 398 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 TCRBV4S1A1TA0A5B7 111 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 IFNA4P05014 189 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 CAV2P51636 162 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 CD69Q07108 199 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 CD300CQ08708 224 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 EXOSC2Q13868 293 aaKnown RBP10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 ZNF343Q6P1L6 599 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 THAP6Q8TBB0 222 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 MRPL36Q9P0J6 103 aaKnown RBP10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 S4R3C0 116 aa10.75□□□□□ -0.69
PHACTR4-203ENST00000463428 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 IGHV3-48P01763 117 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 GPX4P36969 197 aaPredicted RBP10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 AKAP14Q86UN6 197 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 OR11H4Q8NGC9 324 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 PINX1Q96BK5 328 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 CXorf58Q96LI9 332 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 CCDC140Q96MF4 163 aa10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 PAIP2BQ9ULR5 123 aaKnown RBP10.74□□□□□ -0.69
PHACTR4-203ENST00000463428 I3L521 148 aa10.73□□□□□ -0.69
PHACTR4-203ENST00000463428 CST7O76096 145 aa10.73□□□□□ -0.69
PHACTR4-203ENST00000463428 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
PHACTR4-203ENST00000463428 FCGR2BP31994 310 aaPredicted RBP10.73□□□□□ -0.69
PHACTR4-203ENST00000463428 OPRK1P41145 380 aa10.73□□□□□ -0.69
PHACTR4-203ENST00000463428 SULT1A1P50225 295 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms