RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ZNF2Q9BSG1 426 aaPredicted RBP15.08■□□□□ 0
CPSF7-209ENST00000463244 VSIRQ9H7M9 311 aa15.08■□□□□ 0
CPSF7-209ENST00000463244 DNASE2O00115 360 aaPredicted RBP15.07■□□□□ 0
CPSF7-209ENST00000463244 MT-CO2P00403 227 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 IGHV3-48P01763 117 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 EIF4EP06730 217 aaKnown RBP15.07■□□□□ 0
CPSF7-209ENST00000463244 CMTM1Q8IZ96 169 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 SPARTQ8N0X7 666 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 LILRB2Q8N423 598 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 FAM24BQ8N5W8 94 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 VCX3BQ9H321 246 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 IFT46Q9NQC8 304 aa15.07■□□□□ 0
CPSF7-209ENST00000463244 TRAV2A0A0B4J234 112 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 ST8SIA3O43173 380 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 GNG7O60262 68 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 APOHP02749 345 aaPredicted RBP15.06■□□□□ 0
CPSF7-209ENST00000463244 GIG44P09565 113 aaPredicted RBP15.06■□□□□ 0
CPSF7-209ENST00000463244 RBMY1A1P0DJD3 496 aaKnown RBP15.06■□□□□ 0
CPSF7-209ENST00000463244 RBMY1CP0DJD4 496 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 RBMY1FQ15415 496 aaKnown RBP15.06■□□□□ 0
CPSF7-209ENST00000463244 TOMM20LQ6UXN7 152 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 FXYD6Q9H0Q3 95 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 RNF167Q9H6Y7 350 aa15.06■□□□□ 0
CPSF7-209ENST00000463244 IGHV4-28A0A0C4DH34 117 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 A0A1B0GVY2 172 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 GPR31O00270 319 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 XRCC3O43542 346 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 HLA-DMBP28068 263 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 STHQ8IWL8 128 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 FCGR1BQ92637 280 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 PINX1Q96BK5 328 aaKnown RBP15.05■□□□□ -0
CPSF7-209ENST00000463244 ANAPC10Q9UM13 185 aa15.05■□□□□ -0
CPSF7-209ENST00000463244 PMP2P02689 132 aa15.04■□□□□ -0
CPSF7-209ENST00000463244 Q6ZTC4 211 aa15.04■□□□□ -0
CPSF7-209ENST00000463244 DUSP18Q8NEJ0 188 aa15.04■□□□□ -0
CPSF7-209ENST00000463244 ZFAND3Q9H8U3 227 aa15.04■□□□□ -0
CPSF7-209ENST00000463244 IGHV4-4A0A075B6R2 117 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 TRAV10A0A0B4J240 114 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 IGHV3-66A0A0C4DH42 116 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 MIFP14174 115 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 RPL11P62913 178 aaKnown RBP15.03■□□□□ -0
CPSF7-209ENST00000463244 PRCDQ00LT1 54 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 TMEM41BQ5BJD5 291 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 TRPT1Q86TN4 253 aaKnown RBP15.03■□□□□ -0
CPSF7-209ENST00000463244 SEC22AQ96IW7 307 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 FAM212BQ9NTI7 297 aaPredicted RBP15.03■□□□□ -0
CPSF7-209ENST00000463244 RAB26Q9ULW5 256 aa15.03■□□□□ -0
CPSF7-209ENST00000463244 PUS1Q9Y606 427 aaKnown RBP eCLIP15.03■□□□□ -0
CPSF7-209ENST00000463244 ABCA13Q86UQ4 5058 aa15.02■□□□□ -0
CPSF7-209ENST00000463244 ZNF705EA8MWA4 302 aaPredicted RBP15.02■□□□□ -0
CPSF7-209ENST00000463244 TAS2R46P59540 309 aa15.02■□□□□ -0
CPSF7-209ENST00000463244 ZNF600Q6ZNG1 722 aa15.02■□□□□ -0
CPSF7-209ENST00000463244 OR5H2Q8NGV7 314 aa15.02■□□□□ -0
CPSF7-209ENST00000463244 OR4A16Q8NH70 328 aa15.02■□□□□ -0
CPSF7-209ENST00000463244 RABAC1Q9UI14 185 aa15.02■□□□□ -0
CPSF7-209ENST00000463244 LOC100506127A0A0U1RQW1 187 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 MED14OSP0DP75 135 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 NAT1P18440 290 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 NPBWR1P48145 328 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 HSPE1P61604 102 aaKnown RBP15.01□□□□□ -0.01
CPSF7-209ENST00000463244 PHLDA2Q53GA4 152 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 OR6F1Q8NGZ6 308 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 TMEM231Q9H6L2 316 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 X6R8D5 127 aa15.01□□□□□ -0.01
CPSF7-209ENST00000463244 ELOA3CA0A087WX78 387 aaPredicted RBP15□□□□□ -0.01
CPSF7-209ENST00000463244 TMEM127O75204 238 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 IGKV1-39P01597 117 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 IGKV1D-39P04432 117 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 SPP1P10451 314 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 C4BPBP20851 252 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 ERHP84090 104 aaKnown RBP15□□□□□ -0.01
CPSF7-209ENST00000463244 PVRIGQ6DKI7 326 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 MORN3Q6PF18 240 aaPredicted RBP15□□□□□ -0.01
CPSF7-209ENST00000463244 H2BFWTQ7Z2G1 175 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 S100A16Q96FQ6 103 aaKnown RBP15□□□□□ -0.01
CPSF7-209ENST00000463244 RNF126Q9BV68 326 aa15□□□□□ -0.01
CPSF7-209ENST00000463244 A0A1B0GU03 582 aa14.99□□□□□ -0.01
CPSF7-209ENST00000463244 CENPSQ8N2Z9 138 aa14.99□□□□□ -0.01
CPSF7-209ENST00000463244 GRAMD2BQ96HH9 432 aa14.99□□□□□ -0.01
CPSF7-209ENST00000463244 K7EQG2 157 aa14.98□□□□□ -0.01
CPSF7-209ENST00000463244 TMEM50AO95807 157 aa14.98□□□□□ -0.01
CPSF7-209ENST00000463244 HRH1P35367 487 aa14.98□□□□□ -0.01
CPSF7-209ENST00000463244 TBC1D26Q86UD7 250 aa14.98□□□□□ -0.01
CPSF7-209ENST00000463244 A0A1W2PS18 150 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 AMBPP02760 352 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 S100GP29377 79 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 TAS2R20P59543 309 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 UBE2NLQ5JXB2 153 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 TMEM69Q5SWH9 247 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 LYSMD2Q8IV50 215 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 CSNK1G2-AS1Q8NCQ2 148 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 STXBP6Q8NFX7 210 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 MRGPRFQ96AM1 343 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 TBC1D24Q9ULP9 559 aa14.97□□□□□ -0.01
CPSF7-209ENST00000463244 KNCNA6PVL3 124 aa14.96□□□□□ -0.01
CPSF7-209ENST00000463244 NPPCP23582 126 aa14.96□□□□□ -0.01
CPSF7-209ENST00000463244 SPINK9Q5DT21 86 aa14.96□□□□□ -0.01
CPSF7-209ENST00000463244 LPCAT3Q6P1A2 487 aa14.96□□□□□ -0.01
CPSF7-209ENST00000463244 POM121L12Q8N7R1 296 aa14.96□□□□□ -0.01
CPSF7-209ENST00000463244 DCANP1Q8TF63 244 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms