RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ACOT7LQ6ZUV0 252 aa11.2□□□□□ -0.62
COL6A1-202ENST00000463060 PRIMA1Q86XR5 153 aa11.2□□□□□ -0.62
COL6A1-202ENST00000463060 RNASEH2CQ8TDP1 164 aaKnown RBP11.2□□□□□ -0.62
COL6A1-202ENST00000463060 BSCL2Q96G97 398 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-202ENST00000463060 GON7Q9BXV9 100 aa11.2□□□□□ -0.62
COL6A1-202ENST00000463060 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-202ENST00000463060 I3L2K1 104 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 K7EIM0 57 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 CXCL2P19875 107 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 PSMB8P28062 276 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 KIAA0141Q14154 515 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-202ENST00000463060 MLANAQ16655 118 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 ZFP69Q49AA0 526 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 RNF152Q8N8N0 203 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 PPP1R14BQ96C90 147 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 SLC25A31Q9H0C2 315 aa11.19□□□□□ -0.62
COL6A1-202ENST00000463060 CST7O76096 145 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 NDUFB8O95169 186 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 OR8U8P0C7N1 319 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 DEFA4P12838 97 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 HIST1H1BP16401 226 aaKnown RBP11.18□□□□□ -0.62
COL6A1-202ENST00000463060 RAB11AP62491 216 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 BAXQ07812 192 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 LGALSLQ3ZCW2 172 aaPredicted RBP11.18□□□□□ -0.62
COL6A1-202ENST00000463060 SLC25A24Q6NUK1 477 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 ZNF329Q86UD4 541 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 MFFQ9GZY8 342 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 HSPB11Q9Y547 144 aa11.18□□□□□ -0.62
COL6A1-202ENST00000463060 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 CORTO00230 105 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 ARPC5O15511 151 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 IFNA4P05014 189 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-202ENST00000463060 EIF2B2P49770 351 aaKnown RBP11.17□□□□□ -0.62
COL6A1-202ENST00000463060 PROK1P58294 105 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 CD69Q07108 199 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 FOXE3Q13461 319 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 OR2F1Q13607 317 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 ZNF345Q14585 488 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-202ENST00000463060 C9orf62Q8N4C0 152 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 KCNRGQ8N5I3 272 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 INO80EQ8NBZ0 244 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-202ENST00000463060 OR4F5Q8NH21 305 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
COL6A1-202ENST00000463060 CLPSL1A2RUU4 121 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
COL6A1-202ENST00000463060 MT-CO2P00403 227 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 ELANEP08246 267 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-202ENST00000463060 S100A11P31949 105 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 RAB9AP51151 201 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 SLC35B1P78383 322 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 DLK1P80370 383 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 TCTEX1D4Q5JR98 221 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 OR8G2PQ6IF36 304 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 TEX38Q6PEX7 206 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 CENPVQ7Z7K6 275 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-202ENST00000463060 COMMD1Q8N668 190 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 KLHDC1Q8N7A1 406 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-202ENST00000463060 NECAP1Q8NC96 275 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 OR10P1Q8NGE3 313 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 MS4A10Q96PG2 267 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 SLA2Q9H6Q3 261 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
COL6A1-202ENST00000463060 MRPL36Q9P0J6 103 aaKnown RBP11.16□□□□□ -0.62
COL6A1-202ENST00000463060 A0A0D9SG52 128 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 FNDC10F2Z333 226 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 CYB5BO43169 146 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 OR2J3O76001 311 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 NUP62P37198 522 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-202ENST00000463060 NKX2-5P52952 324 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-202ENST00000463060 RHOGP84095 191 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 SLC38A11Q08AI6 406 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
COL6A1-202ENST00000463060 GAMTQ14353 236 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 ATP6V1FQ16864 119 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 STX12Q86Y82 276 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 TMEM217Q8N7C4 229 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 OR5C1Q8NGR4 320 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 PINX1Q96BK5 328 aaKnown RBP11.15□□□□□ -0.62
COL6A1-202ENST00000463060 THYN1Q9P016 225 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 FBXL7Q9UJT9 491 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 PAIP2BQ9ULR5 123 aaKnown RBP11.15□□□□□ -0.62
COL6A1-202ENST00000463060 RNF114Q9Y508 228 aa11.15□□□□□ -0.62
COL6A1-202ENST00000463060 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
COL6A1-202ENST00000463060 TRGV3P03979 118 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms