RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SLC25A48Q6ZT89 311 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF329Q86UD4 541 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 NIT1Q86X76 327 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 PDPNQ86YL7 162 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 RBMXL3Q8N7X1 1067 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ZNRF1Q8ND25 227 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF439Q8NDP4 499 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 STXBP6Q8NFX7 210 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 OR2D3Q8NGH3 330 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 VSTM2AQ8TAG5 236 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 OSR1Q8TAX0 266 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 FAM222BQ8WU58 562 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TSKUQ8WUA8 353 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ITLN1Q8WWA0 313 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 C22orf15Q8WYQ4 148 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM190Q8WZ59 177 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 FAM122AQ96E09 287 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SMIM12Q96EX1 92 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF503Q96F45 646 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 PERPQ96FX8 193 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 LOXL4Q96JB6 756 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 HARBI1Q96MB7 349 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 RCHY1Q96PM5 261 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 GAFA1Q96PS6 74 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SLC25A33Q9BSK2 321 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SLC25A2Q9BXI2 301 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 MRPL20Q9BYC9 149 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 LINC00574Q9H8X3 128 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 DNAJC4Q9NNZ3 241 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 RPUSD1Q9UJJ7 312 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 MRPS16Q9Y3D3 137 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SLC25A15Q9Y619 301 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SOX21Q9Y651 276 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 MPDZO75970 2070 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 LAMA2P24043 3122 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ALPK2Q86TB3 2170 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 THADAQ6YHU6 1953 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 A0A0C4DFX4 3053 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ATG2BQ96BY7 2078 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 SPTBP11277 2137 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV2-26A0A0B4J1V2 119 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 TRAV34A0A0B4J273 112 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV1-69-2A0A0G2JMI3 117 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 TCRBV4S1A1TA0A5B7 111 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MBD3L4A6NDZ8 208 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MBD3L3A6NE82 208 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MBD3L5A6NJ08 208 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 HSBP1L1C9JCN9 74 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 H0YJW9 148 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 CA1P00915 261 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 LHBP01229 141 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 SLC25A5P05141 298 aaKnown RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 FRMD6-AS1P0C7T7 363 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 GATA2P23769 480 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 GLRXP35754 106 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 TFPI2P48307 235 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 CCL11P51671 97 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MEF2CQ06413 473 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 SLAQ13239 276 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MMDQ15546 238 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 VMA21Q3ZAQ7 101 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 Q56UQ5 140 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 CT83Q5H943 113 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 TIMM23BQ5SRD1 257 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 LEMD1Q68G75 181 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 ETFRF1Q6IPR1 90 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 PRR27Q6MZM9 219 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 DHRS13Q6UX07 377 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 C1orf229Q6ZS94 237 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF833PQ6ZTB9 187 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MOB3BQ86TA1 216 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 FAM19A2Q8N3H0 131 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 FAM216BQ8N7L0 139 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 STPG4Q8N801 248 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 THAP8Q8NA92 274 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 NHLRC2Q8NBF2 726 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF738Q8NE65 137 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 NUP35Q8NFH5 326 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 NUDT10Q8NFP7 164 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 OR8B3Q8NGG8 313 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 OR10X1Q8NGY0 326 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 OR9G1Q8NH87 305 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MBD3L2Q8NHZ7 208 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM167AQ8TBQ9 72 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 C18orf32Q8TCD1 76 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 RND1Q92730 232 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 CHCHD1Q96BP2 118 aaKnown RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 FLYWCH2Q96CP2 140 aaKnown RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 SNRNP40Q96DI7 357 aaKnown RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 MBD6Q96DN6 1003 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 DAZAP1Q96EP5 407 aaKnown RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 NUDT11Q96G61 164 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 FMC1Q96HJ9 113 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 FAM167A-AS1Q96KT0 104 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 OR8B2Q96RD0 313 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 CCL13Q99616 98 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 ALKBH7Q9BT30 221 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-204ENST00000462604 TMEM70Q9BUB7 260 aa2.86□□□□□ -1.95
COL8A1-204ENST00000462604 SSBP3Q9BWW4 388 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms