RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 STRAPQ9Y3F4 350 aaKnown RBP4.86□□□□□ -1.63
SMARCC1-204ENST00000462198 PPIAL4CA0A0B4J2A2 164 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 LCE6AA0A183 80 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 A0A1W2PPE2 198 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 OR11H12B2RN74 326 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 NDUFB3O43676 98 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 RBMXL2O75526 392 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 FOXH1O75593 365 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 MT-CO2P00403 227 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CD3DP04234 171 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 GAPDHP04406 335 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CSN2P05814 226 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 WNT2P09544 360 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 IGHV4-38-2P0DP08 117 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 LMO1P25800 156 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CD34P28906 385 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 NPBWR2P48146 333 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 RND2P52198 227 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 SNU13P55769 128 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 UBE2MP61081 183 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 ERVK11-1P61568 191 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 GNB2P62879 340 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 SSBP2P81877 361 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 IL15RAQ13261 267 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 ELOBQ15370 118 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 DEFB112Q30KQ8 113 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 LRRC10Q5BKY1 277 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 SOHLH1Q5JUK2 328 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 LDLRAD2Q5SZI1 272 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CASC10Q5T4H9 136 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 FAM90A2PQ658T7 463 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 STUMQ69YW2 141 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 TEX38Q6PEX7 206 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 LYPD2Q6UXB3 125 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 TEX43Q6ZNM6 134 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 C9orf139Q6ZV77 190 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 PNKDQ8N490 385 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 STXBP6Q8NFX7 210 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 OR11H1Q8NG94 326 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 OR11H2Q8NH07 326 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 OR5B3Q8NH48 314 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 PINX1Q96BK5 328 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 AQP10Q96PS8 301 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CCL13Q99616 98 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 NKX3-1Q99801 234 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 SSBP3Q9BWW4 388 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 NMES1Q9C002 83 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CTDSP1Q9GZU7 261 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 TMEM231Q9H6L2 316 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 HES4Q9HCC6 221 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 CLN8Q9UBY8 286 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 UQCR10Q9UDW1 63 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 ANAPC10Q9UM13 185 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 MRPS28Q9Y2Q9 187 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 TBL2Q9Y4P3 447 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 DNAH9Q9NYC9 4486 aa4.85□□□□□ -1.63
SMARCC1-204ENST00000462198 IGKV1D-17A0A075B6S4 117 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 TRAV18A0A075B6X5 111 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 IGKV1-12A0A0C4DH73 117 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 SLC33A1O00400 549 aaPredicted RBP4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 SH2D1BO14796 132 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 OR7C2O60412 319 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 DUS4LO95620 317 aaKnown RBP4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 HAND1O96004 215 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 IGKV1D-12P01611 117 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 TFF1P04155 84 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 ARG1P05089 322 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 CHRM2P08172 466 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 PSG2P11465 335 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 PGAM2P15259 253 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 PRDX2P32119 198 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 CEACAM3P40198 252 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 GLIPR1P48060 266 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 EFNB2P52799 333 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 FGF12P61328 243 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 PAX2Q02962 417 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 SPIN3Q5JUX0 258 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 C1orf100Q5SVJ3 147 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 WDR25Q64LD2 544 aaPredicted RBP4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 FAM71F2Q6NXP2 309 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 CRIP3Q6Q6R5 217 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 GLIPR1L1Q6UWM5 242 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 ASCL4Q6XD76 172 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 Q6YL49 198 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 LCNL1Q6ZST4 164 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 NIT1Q86X76 327 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 CD177Q8N6Q3 437 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 KLHDC1Q8N7A1 406 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 FAM216BQ8N7L0 139 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 SUMF2Q8NBJ7 301 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 TMED6Q8WW62 240 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 FAM3DQ96BQ1 224 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 GPR146Q96CH1 333 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 CIB3Q96Q77 187 aaPredicted RBP4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 VAMP8Q9BV40 100 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 SRD5A3Q9H8P0 318 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 KAAG1Q9UBP8 84 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 NAT8Q9UHE5 227 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 RAB22AQ9UL26 194 aa4.84□□□□□ -1.63
SMARCC1-204ENST00000462198 VSIG4Q9Y279 399 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms