RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 NDUFA4L2Q9NRX3 87 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 MTFP1Q9UDX5 166 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 ANAPC10Q9UM13 185 aa6.7□□□□□ -1.34
LDB1-203ENST00000461873 C14orf166Q9Y224 244 aaKnown RBP6.7□□□□□ -1.34
LDB1-203ENST00000461873 A0A1B0GVG6 124 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 ANKRD20A5PA0PJZ0 165 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 OR4C46A6NHA9 309 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 ZNF785A8K8V0 405 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 DISC1C4P0D8 188 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 CORTO00230 105 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 JTBO76095 146 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 CD3DP04234 171 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 NPBWR1P48145 328 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 CCR6P51684 374 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 PIGPP57054 158 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 MRPS10P82664 201 aaKnown RBP6.69□□□□□ -1.34
LDB1-203ENST00000461873 WT1-ASQ06250 92 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 KLF9Q13886 244 aaPredicted RBP6.69□□□□□ -1.34
LDB1-203ENST00000461873 CADM3Q8N126 398 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 ARRDC1Q8N5I2 433 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 DUSP18Q8NEJ0 188 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 OR1P1Q8NH06 330 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 SCARB1Q8WTV0 552 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 MRGPRFQ96AM1 343 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 NARS2Q96I59 477 aaKnown RBP6.69□□□□□ -1.34
LDB1-203ENST00000461873 TXN2Q99757 166 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 SPAG8Q99932 426 aaPredicted RBP6.69□□□□□ -1.34
LDB1-203ENST00000461873 GINS3Q9BRX5 216 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 GGTLC1Q9BX51 225 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 C5orf66Q9H5L9 145 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 RABL2AQ9UBK7 228 aaPredicted RBP6.69□□□□□ -1.34
LDB1-203ENST00000461873 MLXQ9UH92 298 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 RABL2BQ9UNT1 228 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 SELENOKQ9Y6D0 94 aa6.69□□□□□ -1.34
LDB1-203ENST00000461873 TEX13DA0A0J9YY54 714 aaPredicted RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 C3orf85A0A1B0GTC6 90 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 A0A1B0GW64 132 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 TMEM213A2RRL7 107 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 CGB1A6NKQ9 187 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 LYRM1O43325 122 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 B3GALNT1O75752 331 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 RAB3DO95716 219 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 HOXA1P49639 335 aaPredicted RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 HSPE1P61604 102 aaKnown RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 RPL11P62913 178 aaKnown RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 MEF2DQ14814 521 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 KLK9Q2XQG4 91 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 STEAP1BQ6NZ63 245 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 UNQ9165/PRO28630Q6UXU0 137 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 CENPSQ8N2Z9 138 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 TMEM229BQ8NBD8 167 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 OR4C16Q8NGL9 310 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 TMEM190Q8WZ59 177 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 SCGB3A2Q96PL1 93 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 ZNF436Q9C0F3 470 aaPredicted RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 TMEM14BQ9NUH8 114 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 MCUBQ9NWR8 336 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 KLK9Q9UKQ9 250 aa6.68□□□□□ -1.34
LDB1-203ENST00000461873 HUWE1Q7Z6Z7 4374 aaKnown RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
LDB1-203ENST00000461873 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 TRAV14DV4A0A0A6YYC5 116 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 C15orf62A8K5M9 175 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 K7EMT4 169 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 DNASE2O00115 360 aaPredicted RBP6.67□□□□□ -1.34
LDB1-203ENST00000461873 ZNF207O43670 478 aaKnown RBP6.67□□□□□ -1.34
LDB1-203ENST00000461873 CD5P06127 495 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 EDN2P20800 178 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 DEFA1P59665 94 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 DEFA3P59666 94 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 PRCDQ00LT1 54 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 SSBP1Q04837 148 aaKnown RBP6.67□□□□□ -1.34
LDB1-203ENST00000461873 ASAH1Q13510 395 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 RGS21Q2M5E4 152 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 ADAMTSL5Q6ZMM2 481 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 NRARPQ7Z6K4 114 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 TERB2Q8NHR7 220 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 FAM110AQ9BQ89 295 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 TMEM231Q9H6L2 316 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 CACFD1Q9UGQ2 172 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
LDB1-203ENST00000461873 IGKV3-7A0A075B6H7 116 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 TRAV6A0A075B6T7 132 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 PIGBOS1A0A0B4J2F0 54 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 FAM240BA0A1B0GVZ2 78 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 RPS10-NUDT3A0A1W2PQS6 291 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 A0A1W2PS18 150 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
LDB1-203ENST00000461873 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
LDB1-203ENST00000461873 CENPXA8MT69 81 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 UBE2CO00762 179 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 TSPAN4O14817 238 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 MT-CO2P00403 227 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
LDB1-203ENST00000461873 AKAIN1P0CW23 69 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 C8orf88P0DMB2 117 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 PI3P19957 117 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 BTCP35070 178 aa6.66□□□□□ -1.34
LDB1-203ENST00000461873 OPRK1P41145 380 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms