RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 YIF1AO95070 293 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
NUP50-213ENST00000461437 ETV6P41212 452 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 ZNF124Q15973 351 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 ODF3L2Q3SX64 289 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 TERB2Q8NHR7 220 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 ZNF486Q96H40 463 aaPredicted RBP11.54□□□□□ -0.56
NUP50-213ENST00000461437 GGTLC1Q9BX51 225 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 C5orf66Q9H5L9 145 aa11.54□□□□□ -0.56
NUP50-213ENST00000461437 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
NUP50-213ENST00000461437 IFNA17P01571 189 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 OR5AC1P0C628 307 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 TFPI2P48307 235 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 MFAP4P55083 255 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 IL18Q14116 193 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 Q6ZRM9 215 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 SLC35G3Q8N808 338 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 OR4C16Q8NGL9 310 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 LHFPL5Q8TAF8 219 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 RNF2Q99496 336 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 PRR13Q9NZ81 148 aa11.53□□□□□ -0.56
NUP50-213ENST00000461437 MRPL36Q9P0J6 103 aaKnown RBP11.53□□□□□ -0.56
NUP50-213ENST00000461437 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 LCE6AA0A183 80 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 TSPAN4O14817 238 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 NUPL2O15504 423 aaKnown RBP11.52□□□□□ -0.57
NUP50-213ENST00000461437 GNG7O60262 68 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 RPL35AP18077 110 aaKnown RBP11.52□□□□□ -0.57
NUP50-213ENST00000461437 TBPP20226 339 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 ERHP84090 104 aaKnown RBP11.52□□□□□ -0.57
NUP50-213ENST00000461437 MLANAQ16655 118 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 ANKRD55Q3KP44 614 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 CCDC71LQ8N9Z2 235 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 DYNC2LI1Q8TCX1 351 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 DIRAS2Q96HU8 199 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
NUP50-213ENST00000461437 OVOL2Q9BRP0 275 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 RTBDNQ9BSG5 229 aaPredicted RBP11.52□□□□□ -0.57
NUP50-213ENST00000461437 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 SMPXQ9UHP9 88 aa11.52□□□□□ -0.57
NUP50-213ENST00000461437 AGRNO00468 2067 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 CHEK1O14757 476 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 NXPH3O95157 252 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
NUP50-213ENST00000461437 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
NUP50-213ENST00000461437 UCP1P25874 307 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
NUP50-213ENST00000461437 APRG1Q8IVJ8 170 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 GBGT1Q8N5D6 347 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 RNASE11Q8TAA1 199 aaKnown RBP11.51□□□□□ -0.57
NUP50-213ENST00000461437 ZFAND1Q8TCF1 268 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 SMIM4Q8WVI0 70 aa11.51□□□□□ -0.57
NUP50-213ENST00000461437 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
NUP50-213ENST00000461437 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
NUP50-213ENST00000461437 C15orf62A8K5M9 175 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 K7EMT4 169 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 EWSR1Q01844 656 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP50-213ENST00000461437 RELQ04864 619 aaPredicted RBP11.5□□□□□ -0.57
NUP50-213ENST00000461437 MEF2DQ14814 521 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 LAMTOR1Q6IAA8 161 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 LILRB2Q8N423 598 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 PDCD10Q9BUL8 212 aa11.5□□□□□ -0.57
NUP50-213ENST00000461437 FNDC4Q9H6D8 234 aaPredicted RBP11.5□□□□□ -0.57
NUP50-213ENST00000461437 TEX13DA0A0J9YY54 714 aaPredicted RBP11.49□□□□□ -0.57
NUP50-213ENST00000461437 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
NUP50-213ENST00000461437 SNCAP37840 140 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 TOMM20LQ6UXN7 152 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 SELENOHQ8IZQ5 122 aaKnown RBP11.49□□□□□ -0.57
NUP50-213ENST00000461437 OR51S1Q8NGJ8 323 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 GLYATL2Q8WU03 294 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 RAB2BQ8WUD1 216 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 C15orf40Q8WUR7 153 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 ST8SIA2Q92186 375 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 RRNAD1Q96FB5 475 aaKnown RBP11.49□□□□□ -0.57
NUP50-213ENST00000461437 NAA60Q9H7X0 242 aa11.49□□□□□ -0.57
NUP50-213ENST00000461437 CCDC59Q9P031 241 aaKnown RBP11.49□□□□□ -0.57
NUP50-213ENST00000461437 C14orf166Q9Y224 244 aaKnown RBP11.49□□□□□ -0.57
NUP50-213ENST00000461437 A0A1B0GU03 582 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 DISC1C4P0D8 188 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 H3BMQ9 156 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 AKAIN1P0CW23 69 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 DUSP18Q8NEJ0 188 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 TMEM230Q96A57 120 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 GPR146Q96CH1 333 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 OR10C1Q96KK4 312 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 TXN2Q99757 166 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 SLIRPQ9GZT3 109 aaKnown RBP11.48□□□□□ -0.57
NUP50-213ENST00000461437 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 ZFAND3Q9H8U3 227 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 CACNG5Q9UF02 275 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 GPR132Q9UNW8 380 aa11.48□□□□□ -0.57
NUP50-213ENST00000461437 PUS1Q9Y606 427 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP50-213ENST00000461437 TRAV14DV4A0A0A6YYC5 116 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms