RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 OR2C3Q8N628 320 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
NCK1-202ENST00000460960 SLA2Q9H6Q3 261 aa11.22□□□□□ -0.61
NCK1-202ENST00000460960 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.22□□□□□ -0.61
NCK1-202ENST00000460960 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 A0A087WW49 117 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 IGHV3-21A0A0B4J1V1 117 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 ANKRD34BA5PLL1 514 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 MFSD2BA6NFX1 497 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 LINC01619G3V211 115 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 PITX3O75364 302 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 JTBO76095 146 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.61
NCK1-202ENST00000460960 RUNX1Q01196 453 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 KLK9Q2XQG4 91 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 C15orf32Q32M92 178 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 HAPLN4Q86UW8 402 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 MITD1Q8WV92 249 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 TM2D3Q9BRN9 247 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 FBXL7Q9UJT9 491 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
NCK1-202ENST00000460960 F11RQ9Y624 299 aaKnown RBP11.21□□□□□ -0.61
NCK1-202ENST00000460960 STARD9Q9P2P6 4700 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 CCSO14618 274 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 DEFA4P12838 97 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 THOC7Q6I9Y2 204 aaKnown RBP11.2□□□□□ -0.62
NCK1-202ENST00000460960 CCDC140Q96MF4 163 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 OR4C12Q96R67 309 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
NCK1-202ENST00000460960 A0A1B0GU03 582 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 C13orf42A0A1B0GVH6 325 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 DUXBA0A1W2PPF3 345 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 RNASE2P10153 161 aaKnown RBP11.19□□□□□ -0.62
NCK1-202ENST00000460960 HOXA1P49639 335 aaPredicted RBP11.19□□□□□ -0.62
NCK1-202ENST00000460960 DEFA1P59665 94 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 DEFA3P59666 94 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 SPCS3P61009 180 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 EXOSC2Q13868 293 aaKnown RBP11.19□□□□□ -0.62
NCK1-202ENST00000460960 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 ZNF343Q6P1L6 599 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 ACSM6Q6P461 480 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 NECAP1Q8NC96 275 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 COQ8AQ8NI60 647 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
NCK1-202ENST00000460960 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 OR10C1Q96KK4 312 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 RBKSQ9H477 322 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 HSPB7Q9UBY9 170 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 TMED3Q9Y3Q3 217 aa11.19□□□□□ -0.62
NCK1-202ENST00000460960 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 INMT-MINDY4F8WBC2 141 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 K7EIM0 57 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 IGHV3-48P01763 117 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 IL5P05113 134 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 ATP5G2Q06055 141 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 PLET1Q6UQ28 207 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 UXS1Q8NBZ7 420 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 OR52E5Q8NH55 327 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 OR1S1Q8NH92 325 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 SPATA25Q9BR10 227 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 MARVELD1Q9BSK0 173 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 PDCD10Q9BUL8 212 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 MAGT1Q9H0U3 335 aa11.18□□□□□ -0.62
NCK1-202ENST00000460960 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 CEBPZOSA8MTT3 80 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 PPP5D1E7EU14 171 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 INS-IGF2F8WCM5 200 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 BMPR1BO00238 502 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 HSD17B13Q7Z5P4 300 aaPredicted RBP11.17□□□□□ -0.62
NCK1-202ENST00000460960 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 MISP3Q96FF7 219 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 ZC4H2Q9NQZ6 224 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 CSMD3Q7Z407 3707 aa11.17□□□□□ -0.62
NCK1-202ENST00000460960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.16□□□□□ -0.62
NCK1-202ENST00000460960 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
NCK1-202ENST00000460960 DHFRP00374 187 aa11.16□□□□□ -0.62
NCK1-202ENST00000460960 IAPPP10997 89 aa11.16□□□□□ -0.62
NCK1-202ENST00000460960 SLC25A6P12236 298 aa11.16□□□□□ -0.62
NCK1-202ENST00000460960 ERHP84090 104 aaKnown RBP11.16□□□□□ -0.62
NCK1-202ENST00000460960 C12orf45Q8N5I9 185 aaPredicted RBP11.16□□□□□ -0.62
NCK1-202ENST00000460960 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
NCK1-202ENST00000460960 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
NCK1-202ENST00000460960 MRPL36Q9P0J6 103 aaKnown RBP11.16□□□□□ -0.62
NCK1-202ENST00000460960 I3L2K1 104 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 HSPB1P04792 205 aaKnown RBP11.15□□□□□ -0.62
NCK1-202ENST00000460960 HIST1H1BP16401 226 aaKnown RBP11.15□□□□□ -0.62
NCK1-202ENST00000460960 MLANAQ16655 118 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 PVRIGQ6DKI7 326 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 ZNF502Q8TBZ5 544 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
NCK1-202ENST00000460960 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms