RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 COX5BP10606 129 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 UNQ6494/PRO21346Q6UXR6 183 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 OSR1Q8TAX0 266 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-217ENST00000459625 HIST1H2BAQ96A08 127 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 FMC1Q96HJ9 113 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 TGFBR3LH3BV60 316 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 PAX4O43316 350 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 CA1P00915 261 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-217ENST00000459625 RPL15P61313 204 aaKnown RBP13.43□□□□□ -0.26
HDAC7-217ENST00000459625 SIGLEC15Q6ZMC9 328 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 RPP21Q9H633 154 aaKnown RBP13.43□□□□□ -0.26
HDAC7-217ENST00000459625 HLA-DQB1P01920 261 aa13.43□□□□□ -0.26
HDAC7-217ENST00000459625 SDHCQ99643 169 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-217ENST00000459625 A0A1B0GUT8 65 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 MYO5AQ9Y4I1 1855 aaKnown RBP13.42□□□□□ -0.26
HDAC7-217ENST00000459625 ZNF257Q9Y2Q1 563 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 KIAA1217Q5T5P2 1943 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 OR2K2Q8NGT1 345 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 GATAD1Q8WUU5 269 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 TDRD15B5MCY1 1934 aaKnown RBP13.42□□□□□ -0.26
HDAC7-217ENST00000459625 CEACAM8P31997 349 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-217ENST00000459625 TMEM86BQ8N661 226 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 Q5PR19 223 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 RIPPLY2Q5TAB7 128 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-217ENST00000459625 STPG2Q8N412 459 aa13.42□□□□□ -0.26
HDAC7-217ENST00000459625 CTAG1AP78358 180 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 ZNF345Q14585 488 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 ZNF48Q96MX3 618 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-217ENST00000459625 C19orf24Q9BVV8 132 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 POLR2AP24928 1970 aaKnown RBP13.41□□□□□ -0.26
HDAC7-217ENST00000459625 LIMS1P48059 325 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 HIST1H4AP62805 103 aaKnown RBP13.41□□□□□ -0.26
HDAC7-217ENST00000459625 ANXA2RQ3ZCQ2 193 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 TRAV41A0A0B4J266 112 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 TMEM8BA6NDV4 472 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 RNF223E7ERA6 249 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 TRBV5-5A0A0J9YX44 114 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 H3BUX3 64 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 USP54Q70EL1 1684 aa13.41□□□□□ -0.26
HDAC7-217ENST00000459625 IGKV1D-43A0A0B4J1Z2 117 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 A0A1W2PR77 199 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 LINC00312Q9Y6C7 94 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-217ENST00000459625 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-217ENST00000459625 C2orf68Q2NKX9 166 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 RNASE7Q9H1E1 156 aaKnown RBP13.4□□□□□ -0.26
HDAC7-217ENST00000459625 TRGV11A0A075B6L2 103 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 SMIM6P0DI80 62 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 SLC25A2Q9BXI2 301 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 SPRR3Q9UBC9 169 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 CACNA1GO43497 2377 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 PYYP10082 97 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 TMEM133Q9H2Q1 129 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 DPRXA6NFQ7 191 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 GGTLC3B5MD39 225 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 POC1AQ8NBT0 407 aa13.4□□□□□ -0.26
HDAC7-217ENST00000459625 MLNRO43193 412 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 LY6HO94772 140 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 TCF23Q7RTU1 214 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 FABP5P3A8MUU1 101 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 ZNF708P17019 499 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 FOXF2Q12947 444 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 TMEM30BQ3MIR4 351 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 COQ2Q96H96 371 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 FCN3O75636 299 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 GPX4P36969 197 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-217ENST00000459625 SRSF4Q08170 494 aaKnown RBP13.39□□□□□ -0.27
HDAC7-217ENST00000459625 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 RNF125Q96EQ8 232 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 CD300EQ496F6 205 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-217ENST00000459625 AKAP11Q9UKA4 1901 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 DICER1Q9UPY3 1922 aaKnown RBP13.39□□□□□ -0.27
HDAC7-217ENST00000459625 HIGD1CA8MV81 97 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 TOMM40O96008 361 aa13.39□□□□□ -0.27
HDAC7-217ENST00000459625 A0A0G2JK05 382 aa13.38□□□□□ -0.27
HDAC7-217ENST00000459625 ESPL1Q14674 2120 aa13.38□□□□□ -0.27
HDAC7-217ENST00000459625 ORMDL3Q8N138 153 aa13.38□□□□□ -0.27
HDAC7-217ENST00000459625 ZNF646O15015 1829 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-217ENST00000459625 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
HDAC7-217ENST00000459625 SP5Q6BEB4 398 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-217ENST00000459625 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
HDAC7-217ENST00000459625 CHTOPQ9Y3Y2 248 aaKnown RBP13.38□□□□□ -0.27
HDAC7-217ENST00000459625 ADAMTSL1Q8N6G6 1762 aa13.38□□□□□ -0.27
HDAC7-217ENST00000459625 SRSF6Q13247 344 aaKnown RBP13.38□□□□□ -0.27
HDAC7-217ENST00000459625 ALX4Q9H161 411 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-217ENST00000459625 ZNF672Q499Z4 452 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-217ENST00000459625 IGFL4Q6B9Z1 124 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 OR10W1Q8NGF6 305 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 CCL1P22362 96 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 PLPPR1Q8TBJ4 325 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 IGHV1-18A0A0C4DH31 117 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 NPIPB13A6NJU9 1138 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 NPIPB5A8MRT5 1133 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 F5H768 121 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 NAPSAO96009 420 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 TMEM249Q2WGJ8 235 aa13.37□□□□□ -0.27
HDAC7-217ENST00000459625 IL17RELQ6ZVW7 336 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms