RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TMEM186Q96B77 213 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 FLYWCH2Q96CP2 140 aaKnown RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 DAZAP1Q96EP5 407 aaKnown RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 RBM14Q96PK6 669 aaKnown RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 GAFA1Q96PS6 74 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 SLC25A33Q9BSK2 321 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 LINC00574Q9H8X3 128 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 GNB4Q9HAV0 340 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 NRN1Q9NPD7 142 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 ZNF71Q9NQZ8 489 aaPredicted RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 RPUSD1Q9UJJ7 312 aaKnown RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 RNF24Q9Y225 148 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 WASHC3Q9Y3C0 194 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 CBY1Q9Y3M2 126 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 AMMECR1Q9Y4X0 333 aaPredicted RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 AHCTF1Q8WYP5 2266 aa2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 MKI67P46013 3256 aaKnown RBP2.73□□□□□ -1.97
HMGN1P18-201ENST00000457642 DIDO1Q9BTC0 2240 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 IGLV3-9A0A075B6K5 115 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 A0A1B0GUS0 222 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DPRXA6NFQ7 191 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 A8MWL6 223 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 GGTLC3B5MD39 225 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 H0YJW9 148 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 K7EQM0 130 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 M0R2Z0 102 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 BMPR1BO00238 502 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CDX4O14627 284 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CHEK1O14757 476 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 NKX2-8O15522 239 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DLEU1O43261 78 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 SPINK4O60575 86 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 SCGB2A1O75556 95 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 LHBP01229 141 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 P01737 135 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 IGHV1-46P01743 117 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 SLC25A5P05141 298 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CGB3P0DN86 165 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CGB7P0DN87 165 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 BTF3P20290 206 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 S100A7P31151 101 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 MC5RP33032 325 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CDKN1AP38936 164 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 LGALS7P47929 136 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 COMPP49747 757 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 ZNF134P52741 427 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 PRRX1P54821 245 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 MFAP2P55001 183 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 LINC00205P59089 165 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 HBBP68871 147 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 KLF5Q13887 457 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TBR1Q16650 682 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 PRSS8Q16651 343 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DEFB109BQ30KR1 87 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TMEM177Q53S58 311 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CT83Q5H943 113 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DMRTA1Q5VZB9 504 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TEX36Q5VZQ5 186 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 RNASEKQ6P5S7 137 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TMEM108Q6UXF1 575 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 ZNF329Q86UD4 541 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DMRTC2Q8IXT2 367 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 LINC00311Q8N616 119 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DEFB123Q8N688 67 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 FAM216BQ8N7L0 139 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 C8orf31Q8N9H6 132 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 THAP8Q8NA92 274 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 C5orf17Q8NAS9 161 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 ST6GALNAC3Q8NDV1 305 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 NUP37Q8NFH4 326 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 FDCSPQ8NFU4 85 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TMEM167AQ8TBQ9 72 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TSKUQ8WUA8 353 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 H1FXQ92522 213 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 FMC1Q96HJ9 113 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 IGF2BP2-AS1Q96M15 143 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 GUCD1Q96NT3 240 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CCL13Q99616 98 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 ATG101Q9BSB4 218 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TMEM208Q9BTX3 173 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 SLC25A2Q9BXI2 301 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 MRPL20Q9BYC9 149 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TMEM191AQ9H0A3 160 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 RNASE7Q9H1E1 156 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 RPP21Q9H633 154 aaKnown RBP2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 LPAR2Q9HBW0 351 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 NGBQ9NPG2 151 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 NDUFA4L2Q9NRX3 87 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 ZNF355PQ9NSJ1 428 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 ZNF492Q9P255 531 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DKK4Q9UBT3 224 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 FBXL7Q9UJT9 491 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 DOCK7Q96N67 2140 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 PTPRBP23467 1997 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 TANC2Q9HCD6 1990 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 FAM186AA6NE01 2351 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CACNA1GO43497 2377 aa2.72□□□□□ -1.97
HMGN1P18-201ENST00000457642 CACNA1DQ01668 2161 aa2.71□□□□□ -1.97
HMGN1P18-201ENST00000457642 PPIAL4EA0A075B759 164 aa2.71□□□□□ -1.98
HMGN1P18-201ENST00000457642 TRAV9-2A0A087WT02 112 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms