RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ZNF430Q9H8G1 570 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-213ENST00000457179 GP6Q9HCN6 339 aa11.21□□□□□ -0.61
TOP3B-213ENST00000457179 PRRG2O14669 202 aa11.21□□□□□ -0.62
TOP3B-213ENST00000457179 RAC2P15153 192 aa11.21□□□□□ -0.62
TOP3B-213ENST00000457179 G6PCP35575 357 aa11.21□□□□□ -0.62
TOP3B-213ENST00000457179 FGFRL1Q8N441 504 aa11.21□□□□□ -0.62
TOP3B-213ENST00000457179 TSKUQ8WUA8 353 aa11.21□□□□□ -0.62
TOP3B-213ENST00000457179 RAXQ9Y2V3 346 aa11.21□□□□□ -0.62
TOP3B-213ENST00000457179 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 RAMP3O60896 148 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 IGKV3-15P01624 115 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 ZNF585BQ52M93 769 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 ASPHD1Q5U4P2 390 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 LRRC29Q8WV35 223 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 LSM10Q969L4 123 aaKnown RBP11.2□□□□□ -0.62
TOP3B-213ENST00000457179 OR2D2Q9H210 308 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 PLSCR4Q9NRQ2 329 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 POLDIP2Q9Y2S7 368 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 HAND1O96004 215 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 IGLV2-14P01704 120 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 SSTR5P35346 364 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 RPL31P62899 125 aaKnown RBP11.2□□□□□ -0.62
TOP3B-213ENST00000457179 CCL8P80075 99 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 MUC15Q8N387 334 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 ZNRF1Q8ND25 227 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 SNRNP40Q96DI7 357 aaKnown RBP11.2□□□□□ -0.62
TOP3B-213ENST00000457179 ITPR1Q14643 2758 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 TAX1BP3O14907 124 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 Q6ZS49 121 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 MOGAT3Q86VF5 341 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 CDC42EP3Q9UKI2 254 aa11.2□□□□□ -0.62
TOP3B-213ENST00000457179 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 TRGV8A0A0C4DH27 118 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-213ENST00000457179 C17orf112F2Z3M2 114 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 DOLPP1Q86YN1 238 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 RNASE7Q9H1E1 156 aaKnown RBP11.19□□□□□ -0.62
TOP3B-213ENST00000457179 LRP5LA4QPB2 252 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 HSBP1O75506 76 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 TOX4O94842 621 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 OR5B3Q8NH48 314 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 OR2V2Q96R30 315 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 SFXN3Q9BWM7 321 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 PKIBQ9C010 78 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 SERTAD4Q9NUC0 356 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
TOP3B-213ENST00000457179 CA7P43166 264 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 LEAP2Q969E1 77 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 GNB1LQ9BYB4 327 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
TOP3B-213ENST00000457179 M0R2Z0 102 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 RRHO14718 337 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 CEACAM4O75871 244 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 RPL30P62888 115 aaKnown RBP11.18□□□□□ -0.62
TOP3B-213ENST00000457179 RHOGP84095 191 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 LRRC10Q5BKY1 277 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 ZNF497Q6ZNH5 498 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 ZNF439Q8NDP4 499 aa11.18□□□□□ -0.62
TOP3B-213ENST00000457179 LIN7CQ9NUP9 197 aaKnown RBP11.18□□□□□ -0.62
TOP3B-213ENST00000457179 BMPR1BO00238 502 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 MGST1P10620 155 aaKnown RBP11.17□□□□□ -0.62
TOP3B-213ENST00000457179 PMCHL1Q16048 86 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 ZNF841Q6ZN19 808 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 C12orf77C9JDV5 145 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 PSG9Q00887 426 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 RNASEKQ6P5S7 137 aaKnown RBP11.17□□□□□ -0.62
TOP3B-213ENST00000457179 WDR82Q6UXN9 313 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 PNKDQ8N490 385 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 KCNIP1Q9NZI2 227 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 FLNCQ14315 2725 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 TNXAQ16473 311 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 TMEM136Q6ZRR5 245 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 C19orf35Q6ZS72 473 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 CLEC5AQ9NY25 188 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 SLC25A15Q9Y619 301 aa11.17□□□□□ -0.62
TOP3B-213ENST00000457179 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 CGAP01215 116 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 GATA2P23769 480 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 SELENOVP59797 346 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 A0A0G2JNJ9 132 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 MBD3L4A6NDZ8 208 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 MBD3L3A6NE82 208 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 MBD3L5A6NJ08 208 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 IQCF6A8MYZ5 107 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 HBZP02008 142 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 DUX4L9Q6RFH8 374 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 LINC00596Q86U02 117 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
TOP3B-213ENST00000457179 MBD3L2Q8NHZ7 208 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-213ENST00000457179 ITLN1Q8WWA0 313 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms