RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FAM87AP0C7U9 286 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 COL8A2P25067 703 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 NUTF2P61970 127 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 CTSZQ9UBR2 303 aa14.93□□□□□ -0.02
SEMA3B-209ENST00000456560 TRBV20OR9-2A0A075B6H5 130 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 MOB3BQ86TA1 216 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 NDUFA4L2Q9NRX3 87 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 TNCP24821 2201 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 IGKV1OR2-108A0A075B7D4 117 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 SCO2A0A1W2PP80 73 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 DLX6P56179 175 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 RPL15P61313 204 aaKnown RBP14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 LRRC10Q5BKY1 277 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 FAM71F2Q6NXP2 309 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 H1FXQ92522 213 aaKnown RBP14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 HARBI1Q96MB7 349 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 NEU1Q99519 415 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 TMEM204Q9BSN7 226 aa14.92□□□□□ -0.02
SEMA3B-209ENST00000456560 LOXP28300 417 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 TEX38Q6PEX7 206 aa14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 OR10W1Q8NGF6 305 aa14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 ST6GALNAC6Q969X2 333 aa14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 NABP2Q9BQ15 211 aa14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 NGBQ9NPG2 151 aa14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 KAAG1Q9UBP8 84 aa14.91□□□□□ -0.02
SEMA3B-209ENST00000456560 PGPEP1LA6NFU8 196 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 INS-IGF2F8WCM5 200 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 MIR17HGQ75NE6 70 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 OR4P4Q8NGL7 312 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 FLYWCH2Q96CP2 140 aaKnown RBP14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 BTF3L4Q96K17 158 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 IMMP2LQ96T52 175 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 MT-CO2P00403 227 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 REG1BP48304 166 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 RPL8P62917 257 aaKnown RBP14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 DIAPH2-AS1Q14236 149 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 MLANAQ16655 118 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 TMEM167AQ8TBQ9 72 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 C11orf52Q96A22 123 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 TMEM186Q96B77 213 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 SLC35E1Q96K37 410 aa14.9□□□□□ -0.02
SEMA3B-209ENST00000456560 CHRNB4P30926 498 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 CD69Q07108 199 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 TMEM256Q8N2U0 113 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 ATG101Q9BSB4 218 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 CHODLQ9H9P2 273 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 AREGP15514 252 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 USF1P22415 310 aaPredicted RBP14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 OR10J1P30954 320 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 ERVFC1-1P60608 527 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 TMEM155Q4W5P6 130 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 PDPNQ86YL7 162 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 PNKDQ8N490 385 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 OR10X1Q8NGY0 326 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 OR4A5Q8NH83 315 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 SNHG12Q9BXW3 62 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 COMMD5Q9GZQ3 224 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 DYNLRB1Q9NP97 96 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 CBLN4Q9NTU7 201 aa14.89□□□□□ -0.03
SEMA3B-209ENST00000456560 A0A1B0GUS0 222 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 IGLV2-23P01705 113 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 ZNF137PP52743 207 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 FOXL1Q12952 345 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 OR4C13Q8NGP0 309 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 OCC1Q8TAD7 63 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 SFRP2Q96HF1 295 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 NAGKQ9UJ70 344 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 ARL2-SNX15V9GYD0 113 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 TLN1Q9Y490 2541 aaKnown RBP14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 TPRP12270 2363 aaKnown RBP14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 CGB1A6NKQ9 187 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 E7EUB6 86 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 ACTL6BO94805 426 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 RBPJQ06330 500 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 C1orf194Q5T5A4 169 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 SGMS2Q8NHU3 365 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 VKORC1Q9BQB6 163 aa14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 POLR3KQ9Y2Y1 108 aaPredicted RBP14.88□□□□□ -0.03
SEMA3B-209ENST00000456560 UCNP55089 124 aa14.87□□□□□ -0.03
SEMA3B-209ENST00000456560 OR9G1Q8NH87 305 aa14.87□□□□□ -0.03
SEMA3B-209ENST00000456560 CACNG8Q8WXS5 425 aa14.87□□□□□ -0.03
SEMA3B-209ENST00000456560 MS4A10Q96PG2 267 aa14.87□□□□□ -0.03
SEMA3B-209ENST00000456560 ROS1P08922 2347 aa14.87□□□□□ -0.03
SEMA3B-209ENST00000456560 MDFIC2A0A1B0GVS7 189 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 M0R143 59 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 GATA2P23769 480 aaPredicted RBP14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 APOBEC3AP31941 199 aaPredicted RBP14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 ERHP84090 104 aaKnown RBP14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 C11orf42Q8N5U0 333 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 VSTM2AQ8TAG5 236 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 ZNF503Q96F45 646 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 C19orf24Q9BVV8 132 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 TECRQ9NZ01 308 aaKnown RBP14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 WASHC3Q9Y3C0 194 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 PCNX1Q96RV3 2341 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 ZNF705FA8MVS1 300 aaPredicted RBP14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 NUPR1O60356 82 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 OR5G3P0C626 314 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 ZNF705DP0CH99 300 aaPredicted RBP14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 ZNF705BP0CI00 300 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms