RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CYB5BO43169 146 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 PFDN1O60925 122 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 OR8U8P0C7N1 319 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 MDKP21741 143 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 PROK1P58294 105 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 TEX38Q6PEX7 206 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 CENPVQ7Z7K6 275 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 COMMD1Q8N668 190 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 KLHDC1Q8N7A1 406 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 RNASEH2CQ8TDP1 164 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 TNFSF18Q9UNG2 199 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 RNF114Q9Y508 228 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 ELANEP08246 267 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 FOXE3Q13461 319 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 ETV3LQ6ZN32 361 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 AQP10Q96PS8 301 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 SLC25A31Q9H0C2 315 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 ZNF355PQ9NSJ1 428 aa12.94□□□□□ -0.34
CCDC90B-202ENST00000455220 HMSDA8MTL9 139 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 SCAF4O95104 1147 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 IFNA4P05014 189 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 RPL12P30050 165 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 SULT1A1P50225 295 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 EWSR1Q01844 656 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 BAXQ07812 192 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 FOXL1Q12952 345 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 EXOSC2Q13868 293 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 HAPLN4Q86UW8 402 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 STX12Q86Y82 276 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 NECAP1Q8NC96 275 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 KLK15Q9H2R5 256 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 THYN1Q9P016 225 aa12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 PAIP2BQ9ULR5 123 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-202ENST00000455220 RNF222A6NCQ9 220 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 FAM223BA6NKX1 122 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 I3L2K1 104 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 K7EIM0 57 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 OR2J3O76001 311 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 PF4V1P10720 104 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 RAB9AP51151 201 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 RHOGP84095 191 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 FAM223AQ8IWN6 122 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 MISP3Q96FF7 219 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 FNDC4Q9H6D8 234 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-202ENST00000455220 CST7O76096 145 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 NDUFB8O95169 186 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 TRGV3P03979 118 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 ARL16Q0P5N6 197 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 OR10P1Q8NGE3 313 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 HSPB11Q9Y547 144 aa12.91□□□□□ -0.34
CCDC90B-202ENST00000455220 ARPC5O15511 151 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 MT-CO2P00403 227 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 GPX4P36969 197 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 OPRK1P41145 380 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 TPPP2P59282 170 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 NHLH2Q02577 135 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 CD69Q07108 199 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 KIAA0141Q14154 515 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 OR8G2PQ6IF36 304 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 INO80EQ8NBZ0 244 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 PINX1Q96BK5 328 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 USMG5Q96IX5 58 aa12.9□□□□□ -0.34
CCDC90B-202ENST00000455220 RPS10-NUDT3A0A1W2PQS6 291 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 NUP62P37198 522 aaPredicted RBP12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 HBG1P69891 147 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 HBG2P69892 147 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 DEFA5Q01523 94 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 C15orf32Q32M92 178 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 OR4X2Q8NGF9 303 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 VN1R17PQ8TDU5 208 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 CACNG8Q8WXS5 425 aa12.9□□□□□ -0.35
CCDC90B-202ENST00000455220 RPLP1P05386 114 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 S100A11P31949 105 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 DLK1P80370 383 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 SLC38A11Q08AI6 406 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 ZNF345Q14585 488 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 MLANAQ16655 118 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 ETFRF1Q6IPR1 90 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 SLC16A13Q7RTY0 426 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 TMEM217Q8N7C4 229 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 SCARB1Q8WTV0 552 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 CXorf58Q96LI9 332 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 MFFQ9GZY8 342 aa12.89□□□□□ -0.35
CCDC90B-202ENST00000455220 FBN1P35555 2871 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms