RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 AUNIPQ9H7T9 357 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 FAM212BQ9NTI7 297 aaPredicted RBP5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 EHFQ9NZC4 300 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 IGHV3OR16-8A0A075B7F1 116 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 IGHV3-21A0A0B4J1V1 117 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 C15orf61A6NNL5 157 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 DNASE2O00115 360 aaPredicted RBP5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 GPR31O00270 319 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 GNG7O60262 68 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 PGLYRP1O75594 196 aaPredicted RBP5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 KRASP01116 189 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 RLN1P04808 185 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 PTHLHP12272 177 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 SDC2P34741 201 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 LPAR6P43657 344 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 TFPI2P48307 235 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 MFAP2P55001 183 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 IDNKQ5T6J7 187 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 FAM90A2PQ658T7 463 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 IZUMO2Q6UXV1 221 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 LINC00336Q6ZUF6 198 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 ZNF114Q8NC26 417 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 DUSP18Q8NEJ0 188 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 OR5H2Q8NGV7 314 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 SLC25A46Q96AG3 418 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 SLC25A38Q96DW6 304 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 MISP3Q96FF7 219 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 S100A16Q96FQ6 103 aaKnown RBP5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 NXF2Q9GZY0 626 aaKnown RBP5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 Q9H521 79 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 TMEM14BQ9NUH8 114 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 RAB26Q9ULW5 256 aa5.88□□□□□ -1.47
NIF3L1-209ENST00000454952 IGKV3-7A0A075B6H7 116 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 A0A1W2PS18 150 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 ST8SIA3O43173 380 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 XRCC3O43542 346 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 SPP1P10451 314 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 MIFP14174 115 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 G6PCP35575 357 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 NPBWR1P48145 328 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 RPL11P62913 178 aaKnown RBP5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 ERHP84090 104 aaKnown RBP5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 MXD1Q05195 221 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 MORN3Q6PF18 240 aaPredicted RBP5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 TCF24Q7RTU0 167 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 H2BFWTQ7Z2G1 175 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 STHQ8IWL8 128 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 OR6F1Q8NGZ6 308 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 OR4A16Q8NH70 328 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 FCAMRQ8WWV6 532 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 NARS2Q96I59 477 aaKnown RBP5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 ZNF2Q9BSG1 426 aaPredicted RBP5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 YTHDF1Q9BYJ9 559 aaKnown RBP5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
NIF3L1-209ENST00000454952 TRAV10A0A0B4J240 114 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 LOC100506127A0A0U1RQW1 187 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 IGLL5B9A064 214 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 I3L2K1 104 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 CORTO00230 105 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 MT-CO2P00403 227 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 EIF2B2P49770 351 aaKnown RBP5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 SUB1P53999 127 aaKnown RBP eCLIP5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 PRCDQ00LT1 54 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 KCTD21Q4G0X4 260 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 ZNF600Q6ZNG1 722 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 SPARTQ8N0X7 666 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 GBGT1Q8N5D6 347 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 OR5H6Q8NGV6 325 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 MS4A6AQ9H2W1 248 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 VSIRQ9H7M9 311 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 NSG2Q9Y328 171 aa5.86□□□□□ -1.47
NIF3L1-209ENST00000454952 IGHV3-49A0A0A0MS15 119 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 ATG12O94817 140 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 PMP2P02689 132 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 FCER2P06734 321 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 NAT1P18440 290 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 NPPCP23582 126 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 SNCAP37840 140 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 RFX2P48378 723 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 DEFB131AP59861 70 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 HSPE1P61604 102 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 ZNF124Q15973 351 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 UBE2NLQ5JXB2 153 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 TMEM69Q5SWH9 247 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 TOMM20LQ6UXN7 152 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 Q8NAQ8 132 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 PINX1Q96BK5 328 aaKnown RBP5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 GRAMD2BQ96HH9 432 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 ZNF414Q96IQ9 312 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 METTL26Q96S19 204 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 RNF126Q9BV68 326 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 RABAC1Q9UI14 185 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 APLNQ9ULZ1 77 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 ANAPC10Q9UM13 185 aa5.85□□□□□ -1.47
NIF3L1-209ENST00000454952 KMT2AQ03164 3969 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms