RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 OR1L8Q8NGR8 309 aa3.86□□□□□ -1.79
RIF1-207ENST00000454583 CD300LFQ8TDQ1 290 aa3.86□□□□□ -1.79
RIF1-207ENST00000454583 PFDN2Q9UHV9 154 aa3.86□□□□□ -1.79
RIF1-207ENST00000454583 TRBV20OR9-2A0A075B6H5 130 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 CLPSL1A2RUU4 121 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 C5orf52A6NGY3 159 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 EREGO14944 169 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 IGLV2-8P01709 118 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 NFYBP25208 207 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 PLP1P60201 277 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 GUK1Q16774 197 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 ABCA11PQ4W5N1 156 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 KHDC3LQ587J8 217 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 RFESDQ8TAC1 157 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 HIST1H2BAQ96A08 127 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 GNPNAT1Q96EK6 184 aaPredicted RBP3.85□□□□□ -1.79
RIF1-207ENST00000454583 GGTLC1Q9BX51 225 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 SLC25A31Q9H0C2 315 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 OR2S2Q9NQN1 319 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 U3KQE9 123 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 POLQO75417 2590 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 TEP1Q99973 2627 aaKnown RBP3.85□□□□□ -1.79
RIF1-207ENST00000454583 ZNF705EA8MWA4 302 aaPredicted RBP3.85□□□□□ -1.79
RIF1-207ENST00000454583 TIMM23O14925 209 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 MED6O75586 246 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 NDUFA7O95182 113 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 RPL15P61313 204 aaKnown RBP3.85□□□□□ -1.79
RIF1-207ENST00000454583 PRSS8Q16651 343 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 SSX9Q7RTT3 188 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 C16orf82Q7Z2V1 217 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 RAB39BQ96DA2 213 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 IGF2BP2-AS1Q96M15 143 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 ATP6V0BQ99437 205 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 S1PR3Q99500 378 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 SSX3Q99909 188 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 RSG1Q9BU20 258 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 MAGT1Q9H0U3 335 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 FNDC4Q9H6D8 234 aaPredicted RBP3.85□□□□□ -1.79
RIF1-207ENST00000454583 HIF1ANQ9NWT6 349 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 SLC45A2Q9UMX9 530 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 DOPEY2Q9Y3R5 2298 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 NAV3Q8IVL0 2385 aa3.85□□□□□ -1.79
RIF1-207ENST00000454583 RBFOX3A6NFN3 312 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 A6NLC8 198 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 K7EIM0 57 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 UBE2CO00762 179 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 SPINT2O43291 252 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 ATP5IP56385 69 aaPredicted RBP3.84□□□□□ -1.79
RIF1-207ENST00000454583 HILS1P60008 231 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 TMEM267Q0VDI3 215 aaPredicted RBP3.84□□□□□ -1.79
RIF1-207ENST00000454583 FOXE3Q13461 319 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 ELOBQ15370 118 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 RHEBQ15382 184 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 DEFB112Q30KQ8 113 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 CYB5R2Q6BCY4 276 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 ADAMTSL5Q6ZMM2 481 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 C15orf54Q8N8G6 183 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 LFNGQ8NES3 379 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 ZNF430Q9H8G1 570 aaPredicted RBP3.84□□□□□ -1.79
RIF1-207ENST00000454583 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.84□□□□□ -1.79
RIF1-207ENST00000454583 TMEM140Q9NV12 185 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 MAST4O15021 2626 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 VSTM5A8MXK1 200 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 FAM25EA8MYX2 175 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 STAG3L2P0CL84 134 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 STAG3L3P0CL85 134 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 EDDM3AQ14507 147 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 CLEC2AQ6UVW9 174 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 SLC35E3Q7Z769 313 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 CBLN2Q8IUK8 224 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 R3HDM4Q96D70 268 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 ADTRPQ96IZ2 230 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 SLC35B3Q9H1N7 401 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 SDF2L1Q9HCN8 221 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 PSENENQ9NZ42 101 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 DPM3Q9P2X0 92 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 DNAH8Q96JB1 4490 aa3.84□□□□□ -1.79
RIF1-207ENST00000454583 DNAH10Q8IVF4 4471 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 CXorf65A6NEN9 183 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 TYMSP04818 313 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 PFN1P07737 140 aaKnown RBP3.84□□□□□ -1.8
RIF1-207ENST00000454583 IRF2P14316 349 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 RPL29P47914 159 aaKnown RBP3.84□□□□□ -1.8
RIF1-207ENST00000454583 S100A10P60903 97 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 ARF6P62330 175 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 COX8CQ7Z4L0 72 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 SVBPQ8N300 66 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 RXFP4Q8TDU9 374 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 DTD1Q8TEA8 209 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 RHOVQ96L33 236 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 GSKIPQ9P0R6 139 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 MEGF8Q7Z7M0 2845 aa3.84□□□□□ -1.8
RIF1-207ENST00000454583 TMEM89A2RUT3 159 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 DFFBO76075 338 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 SNRNP70P08621 437 aaKnown RBP3.83□□□□□ -1.8
RIF1-207ENST00000454583 OR5G3P0C626 314 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 LGALS4P56470 323 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 RAB2AP61019 212 aa3.83□□□□□ -1.8
RIF1-207ENST00000454583 EIF5AP63241 154 aaKnown RBP3.83□□□□□ -1.8
RIF1-207ENST00000454583 COA6Q5JTJ3 125 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms