RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CLEC19AQ6UXS0 136 aa21.46■■□□□ 1.03
SMARCC1-203ENST00000454240 OR1S1Q8NH92 325 aa21.46■■□□□ 1.03
SMARCC1-203ENST00000454240 ENKURQ8TC29 256 aa21.46■■□□□ 1.03
SMARCC1-203ENST00000454240 MITD1Q8WV92 249 aa21.46■■□□□ 1.03
SMARCC1-203ENST00000454240 GPR61Q9BZJ8 451 aa21.46■■□□□ 1.03
SMARCC1-203ENST00000454240 NOTCH1P46531 2555 aa21.45■■□□□ 1.03
SMARCC1-203ENST00000454240 ADAP1O75689 374 aa21.45■■□□□ 1.02
SMARCC1-203ENST00000454240 SCARB1Q8WTV0 552 aa21.45■■□□□ 1.02
SMARCC1-203ENST00000454240 CEBPZOSA8MTT3 80 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 PPP5D1E7EU14 171 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 WIPF1O43516 503 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 CLEC3BP05452 202 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 SUB1P53999 127 aaKnown RBP eCLIP21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 DEFA1P59665 94 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 DEFA3P59666 94 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 RPEL1Q2QD12 228 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 NRARPQ7Z6K4 114 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 MISP3Q96FF7 219 aa21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 HEYLQ9NQ87 328 aaPredicted RBP21.44■■□□□ 1.02
SMARCC1-203ENST00000454240 SEC14L6B5MCN3 397 aa21.43■■□□□ 1.02
SMARCC1-203ENST00000454240 I3L2K1 104 aa21.43■■□□□ 1.02
SMARCC1-203ENST00000454240 GGCTO75223 188 aaKnown RBP21.43■■□□□ 1.02
SMARCC1-203ENST00000454240 ATP6V0BQ99437 205 aa21.43■■□□□ 1.02
SMARCC1-203ENST00000454240 IGHV3-21A0A0B4J1V1 117 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 ARL3P36405 182 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 HTR2BP41595 481 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 C9orf66Q5T8R8 295 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 ACSM6Q6P461 480 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 ZNF431Q8TF32 576 aaPredicted RBP21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 SEC22CQ9BRL7 303 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 RBKSQ9H477 322 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 C21orf62Q9NYP8 219 aa21.42■■□□□ 1.02
SMARCC1-203ENST00000454240 MPTX1A8MV57 137 aa21.41■■□□□ 1.02
SMARCC1-203ENST00000454240 FAM90A26D6RGX4 464 aa21.41■■□□□ 1.02
SMARCC1-203ENST00000454240 F8W735 103 aaPredicted RBP21.41■■□□□ 1.02
SMARCC1-203ENST00000454240 MT-CO2P00403 227 aa21.41■■□□□ 1.02
SMARCC1-203ENST00000454240 SYNJ2BPP57105 145 aa21.41■■□□□ 1.02
SMARCC1-203ENST00000454240 HIPK2Q9H2X6 1198 aa21.41■■□□□ 1.02
SMARCC1-203ENST00000454240 IFNA21P01568 189 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 IL5P05113 134 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 GPR183P32249 361 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 TATDN3Q17R31 274 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 C2orf83Q53S99 150 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 C11orf87Q6NUJ2 197 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 DTD1Q8TEA8 209 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 DNAH3Q8TD57 4116 aa21.4■■□□□ 1.02
SMARCC1-203ENST00000454240 CORTO00230 105 aa21.39■■□□□ 1.01
SMARCC1-203ENST00000454240 OR2C1O95371 312 aa21.39■■□□□ 1.01
SMARCC1-203ENST00000454240 GPHB5Q86YW7 130 aa21.39■■□□□ 1.01
SMARCC1-203ENST00000454240 PINX1Q96BK5 328 aaKnown RBP21.39■■□□□ 1.01
SMARCC1-203ENST00000454240 FCGR2BP31994 310 aaPredicted RBP21.38■■□□□ 1.01
SMARCC1-203ENST00000454240 INSL3P51460 131 aa21.38■■□□□ 1.01
SMARCC1-203ENST00000454240 EGFEM1PQ0D2K5 195 aa21.38■■□□□ 1.01
SMARCC1-203ENST00000454240 SLC24A4Q8NFF2 622 aa21.38■■□□□ 1.01
SMARCC1-203ENST00000454240 OR9G4Q8NGQ1 327 aa21.38■■□□□ 1.01
SMARCC1-203ENST00000454240 OR2T8A6NH00 312 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 MFAP4P55083 255 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 PLET1Q6UQ28 207 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 TMEM170AQ8WVE7 144 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 BSCL2Q96G97 398 aaPredicted RBP21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 TXN2Q99757 166 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 ZC4H2Q9NQZ6 224 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 U3KQ87 197 aa21.37■■□□□ 1.01
SMARCC1-203ENST00000454240 TGOLN2O43493 480 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 DEFA6Q01524 100 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 SPSB3Q6PJ21 355 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 IL34Q6ZMJ4 242 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 C12orf45Q8N5I9 185 aaPredicted RBP21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 MARVELD1Q9BSK0 173 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 ELOVL1Q9BW60 279 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 MEGF8Q7Z7M0 2845 aa21.36■■□□□ 1.01
SMARCC1-203ENST00000454240 MED6O75586 246 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 IGHV3-48P01763 117 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 NPY1RP25929 384 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 ID3Q02535 119 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 Q56UQ5 140 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 OR4D5Q8NGN0 318 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 OR10C1Q96KK4 312 aa21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 FNDC4Q9H6D8 234 aaPredicted RBP21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 GAR1Q9NY12 217 aaKnown RBP21.35■■□□□ 1.01
SMARCC1-203ENST00000454240 INMT-MINDY4F8WBC2 141 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 LGALS9O00182 355 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 SAP30O75446 220 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 KRTAP10-11P60412 298 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 NOXA1Q86UR1 476 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 UBAC2Q8NBM4 344 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 RNASEH2CQ8TDP1 164 aaKnown RBP21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 OR4C12Q96R67 309 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 CHRDL1Q9BU40 450 aa21.34■■□□□ 1.01
SMARCC1-203ENST00000454240 SYNGR2O43760 224 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 IFNA10P01566 189 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 CTSGP08311 255 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 ATP5IP56385 69 aaPredicted RBP21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 MLANAQ16655 118 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 FAM106AQ4KMX7 169 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 REC114Q7Z4M0 266 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 UXS1Q8NBZ7 420 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 ZNF436Q9C0F3 470 aaPredicted RBP21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 MAGT1Q9H0U3 335 aa21.33■■□□□ 1.01
SMARCC1-203ENST00000454240 PEMTQ9UBM1 199 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms