RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CHST6Q9GZX3 395 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 SPRR3Q9UBC9 169 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 NOP16Q9Y3C1 178 aaKnown RBP6.31□□□□□ -1.4
BRCC3-208ENST00000453705 ALPK2Q86TB3 2170 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 CSN2P05814 226 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 HIST1H1DP16402 221 aaKnown RBP6.31□□□□□ -1.4
BRCC3-208ENST00000453705 COX5AP20674 150 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 ZBTB25P24278 435 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 NPY1RP25929 384 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 BRS3P32247 399 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
BRCC3-208ENST00000453705 ZNF266Q14584 549 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 LINC00596Q86U02 117 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 OR51B2Q9Y5P1 312 aa6.31□□□□□ -1.4
BRCC3-208ENST00000453705 TRAV14DV4A0A0A6YYC5 116 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 A0A0A6YYD4 124 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 MSGN1A6NI15 193 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 CCL21O00585 134 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 WT1P19544 449 aaPredicted RBP6.3□□□□□ -1.4
BRCC3-208ENST00000453705 DLX1P56177 255 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 KISS1Q15726 138 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 BATFQ16520 125 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 LINC00303Q3SY05 128 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 AWAT2Q6E213 333 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 GLIPR1L1Q6UWM5 242 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 CHST4Q8NCG5 386 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 OR2K2Q8NGT1 345 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 WDR13Q9H1Z4 485 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 ASF1BQ9NVP2 202 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 CACFD1Q9UGQ2 172 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 SNURFLB1AK76 121 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 SPINK2P20155 84 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 GABRA2P47869 451 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 GAGE2BQ13066 116 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 MLANAQ16655 118 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 DEFB109BQ30KR1 87 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 GAGE2EQ4V326 116 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 GAGE2AQ6NT46 116 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 LHFPL1Q86WI0 220 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 GAGE2DQ9UEU5 116 aa6.3□□□□□ -1.4
BRCC3-208ENST00000453705 IGHV2-70DA0A0C4DH43 119 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 EEF1E1-BLOC1S5C9J1V9 151 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 SMKR1H3BMG3 65 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 M0R1B8 84 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 WDR1O75083 606 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 NDUFS7O75251 213 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 YIF1AO95070 293 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 AKR1C2P52895 323 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 AKR1C1Q04828 323 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 AKR1C8PQ5T2L2 129 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 Q6ZS92 163 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 NEGR1Q7Z3B1 354 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 MED12LQ86YW9 2145 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 MBD3L1Q8WWY6 194 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 DLX4Q92988 240 aaPredicted RBP6.29□□□□□ -1.4
BRCC3-208ENST00000453705 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 YPEL4Q96NS1 127 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 MRPL27Q9P0M9 148 aaKnown RBP6.29□□□□□ -1.4
BRCC3-208ENST00000453705 FLNBO75369 2602 aaKnown RBP6.29□□□□□ -1.4
BRCC3-208ENST00000453705 TRBV6-6A0A0A6YYG2 114 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 A6NIN4 97 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 TSPOP30536 169 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCC3-208ENST00000453705 SLC25A42Q86VD7 318 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 ZNF584Q8IVC4 421 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 SRSF12Q8WXF0 261 aaKnown RBP6.29□□□□□ -1.4
BRCC3-208ENST00000453705 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 C1QTNF4Q9BXJ3 329 aa6.29□□□□□ -1.4
BRCC3-208ENST00000453705 MAP1BP46821 2468 aaKnown RBP6.29□□□□□ -1.4
BRCC3-208ENST00000453705 C5orf63A6NC05 138 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 ZNF736B4DX44 427 aaPredicted RBP6.28□□□□□ -1.4
BRCC3-208ENST00000453705 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
BRCC3-208ENST00000453705 TOMM40O96008 361 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 CYB5AP00167 134 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 FAM157CP0CG43 387 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 PGA5P0DJD9 388 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 PSG1P11464 419 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 CHRNB4P30926 498 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 MDH2P40926 338 aaKnown RBP6.28□□□□□ -1.4
BRCC3-208ENST00000453705 PPP1CBP62140 327 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 PRDX4Q13162 271 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 FBXW12Q6X9E4 464 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 OR51T1Q8NGJ9 327 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 SMIM8Q96KF7 97 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 MPC1Q9Y5U8 109 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 DMXL2Q8TDJ6 3036 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 FABP5P3A8MUU1 101 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 SFTA3P0C7M3 94 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 TAS2R46P59540 309 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
BRCC3-208ENST00000453705 HEPN1Q6WQI6 88 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 FBXL14Q8N1E6 418 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 FDCSPQ8NFU4 85 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 PIFOQ8TCI5 191 aa6.28□□□□□ -1.4
BRCC3-208ENST00000453705 CACNA1CQ13936 2221 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 M0R2Z0 102 aa6.27□□□□□ -1.41
BRCC3-208ENST00000453705 CD3DP04234 171 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms