RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MFAP2P55001 183 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 GSG1LQ6UXU4 331 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 PINX1Q96BK5 328 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 OR10C1Q96KK4 312 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 S4R3C0 116 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 U3KQ87 197 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 WRBO00258 174 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 CCSO14618 274 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 SYNGR2O43760 224 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 LY86O95711 162 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 ZP3P21754 424 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 RPP30P78346 268 aaKnown RBP11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 ID3Q02535 119 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 TATDN3Q17R31 274 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 CLEC19AQ6UXS0 136 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 LINC00482Q8N8I6 264 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 SLC24A4Q8NFF2 622 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 OR4D5Q8NGN0 318 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 SCARB1Q8WTV0 552 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 TENM1Q9UKZ4 2725 aa11.27□□□□□ -0.61
NCKIPSD-207ENST00000453349 TNCP24821 2201 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 IGHV3-21A0A0B4J1V1 117 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 MFSD2BA6NFX1 497 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 SCGB1D2O95969 90 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 MT-CO2P00403 227 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 CLEC3BP05452 202 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 FHL3Q13643 280 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 BSXQ3C1V8 233 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 WFDC9Q8NEX5 89 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 C2orf50Q96LR7 162 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 MAGT1Q9H0U3 335 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
NCKIPSD-207ENST00000453349 I3L2K1 104 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 SSNA1O43805 119 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 GGCTO75223 188 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 IAPPP10997 89 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 NPY1RP25929 384 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 ARL3P36405 182 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 SLURP1P55000 103 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 MFAP4P55083 255 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 RPEL1Q2QD12 228 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 PVRIGQ6DKI7 326 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 ZNF502Q8TBZ5 544 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 DCUN1D4Q92564 292 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 ATP6V0BQ99437 205 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 TXN2Q99757 166 aa11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 MCRIP2Q9BUT9 160 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 GAR1Q9NY12 217 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-207ENST00000453349 RPS10-NUDT3A0A1W2PQS6 291 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 K7EIM0 57 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 GOSR2O14653 212 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 OVOL1O14753 267 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 TRBV12-3P01733 135 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 OPRK1P41145 380 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 POLR2GP62487 172 aaKnown RBP eCLIP11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 RAB11AP62491 216 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 Q56UQ5 140 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 ETFRF1Q6IPR1 90 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 RCC1LQ96I51 464 aaKnown RBP11.24□□□□□ -0.61
NCKIPSD-207ENST00000453349 PPP5D1E7EU14 171 aa11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 BMPR1BO00238 502 aa11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 IFNA4P05014 189 aa11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 GPR183P32249 361 aa11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 KLF5Q13887 457 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 ACSM6Q6P461 480 aa11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 BSCL2Q96G97 398 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 PAIP2BQ9ULR5 123 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-207ENST00000453349 C7orf66A4D0T2 115 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 OR2T8A6NH00 312 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 TGOLN2O43493 480 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 SSSCA1O60232 199 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 GNG7O60262 68 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 OR2C1O95371 312 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 IGHV3-48P01763 117 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 NPBWR1P48145 328 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 CYCSP99999 105 aaKnown RBP11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 MLANAQ16655 118 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 FAM106AQ4KMX7 169 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 C11orf87Q6NUJ2 197 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 SMIM8Q96KF7 97 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 ELOVL1Q9BW60 279 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 GPR61Q9BZJ8 451 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 ZC4H2Q9NQZ6 224 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 STRAPQ9Y3F4 350 aaKnown RBP11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 ALG5Q9Y673 324 aa11.22□□□□□ -0.61
NCKIPSD-207ENST00000453349 STAB1Q9NY15 2570 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms