RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 SP6Q3SY56 376 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 CLVS1Q8IUQ0 354 aaPredicted RBP6.5□□□□□ -1.37
RFX3-209ENST00000451859 OR1L6Q8NGR2 347 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 OR5B3Q8NH48 314 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
RFX3-209ENST00000451859 MARCH1Q8TCQ1 289 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 BSCL2Q96G97 398 aaPredicted RBP6.5□□□□□ -1.37
RFX3-209ENST00000451859 TP53RKQ96S44 253 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 ABHD1Q96SE0 405 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 ZNF436Q9C0F3 470 aaPredicted RBP6.5□□□□□ -1.37
RFX3-209ENST00000451859 MIXL1Q9H2W2 232 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 HIPK2Q9H2X6 1198 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 EDA2RQ9HAV5 297 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 MRPL27Q9P0M9 148 aaKnown RBP6.5□□□□□ -1.37
RFX3-209ENST00000451859 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 MTFP1Q9UDX5 166 aa6.5□□□□□ -1.37
RFX3-209ENST00000451859 AGRNO00468 2067 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 CTDSP2O14595 271 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 YIF1AO95070 293 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 RAB3DO95716 219 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 IGKV1-5P01602 117 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
RFX3-209ENST00000451859 TAS2R19P59542 299 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 TRIM16LQ309B1 348 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 CDPF1Q6NVV7 123 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 SPSB3Q6PJ21 355 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 LINC00322Q6ZN03 302 aaPredicted RBP6.49□□□□□ -1.37
RFX3-209ENST00000451859 LHFPL1Q86WI0 220 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 ARRDC1Q8N5I2 433 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 OR2C3Q8N628 320 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 SLC35G3Q8N808 338 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 OR13C8Q8NGS7 320 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 MARC2Q969Z3 335 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
RFX3-209ENST00000451859 FAM212BQ9NTI7 297 aaPredicted RBP6.49□□□□□ -1.37
RFX3-209ENST00000451859 HYDINQ4G0P3 5121 aa6.49□□□□□ -1.37
RFX3-209ENST00000451859 IGKV3-7A0A075B6H7 116 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 IGHV3OR16-13A0A075B7E8 117 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 IGHV3-74A0A0B4J1X5 117 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 C3orf85A0A1B0GTC6 90 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 NDUFA4O00483 81 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 ST8SIA3O43173 380 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 MT-CO2P00403 227 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 IFNA17P01571 189 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 C8orf88P0DMB2 117 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 TFPI2P48307 235 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 ALDH3B2P48448 385 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 HOXA1P49639 335 aaPredicted RBP6.48□□□□□ -1.37
RFX3-209ENST00000451859 MFAP4P55083 255 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 RND3P61587 244 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 HSPE1P61604 102 aaKnown RBP6.48□□□□□ -1.37
RFX3-209ENST00000451859 ERHP84090 104 aaKnown RBP6.48□□□□□ -1.37
RFX3-209ENST00000451859 PRCDQ00LT1 54 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 IL18Q14116 193 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 ANKRD55Q3KP44 614 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 STEAP1BQ6NZ63 245 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 CCDC71LQ8N9Z2 235 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 TMEM229BQ8NBD8 167 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 OR1P1Q8NH06 330 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 ZNF486Q96H40 463 aaPredicted RBP6.48□□□□□ -1.37
RFX3-209ENST00000451859 PDCD10Q9BUL8 212 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 GGTLC1Q9BX51 225 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
RFX3-209ENST00000451859 C6orf62Q9GZU0 229 aaPredicted RBP6.48□□□□□ -1.37
RFX3-209ENST00000451859 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 LOC102724200A0A096LPH7 203 aaPredicted RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 TRAV25A0A0B4J276 109 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 A0A0G2JRQ6 117 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 I3L2K1 104 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 NUPL2O15504 423 aaKnown RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 GNG7O60262 68 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 NOL3O60936 208 aaKnown RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 NXPH3O95157 252 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 CTSDP07339 412 aaPredicted RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 CTSGP08311 255 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 TBPP20226 339 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 SNCAP37840 140 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 ETV6P41212 452 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 LAMTOR1Q6IAA8 161 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 CADM3Q8N126 398 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 TERB2Q8NHR7 220 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 ZFAND1Q8TCF1 268 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 C15orf40Q8WUR7 153 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 RRNAD1Q96FB5 475 aaKnown RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 DIRAS2Q96HU8 199 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 SPAG8Q99932 426 aaPredicted RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 C5orf66Q9H5L9 145 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 C14orf166Q9Y224 244 aaKnown RBP6.47□□□□□ -1.37
RFX3-209ENST00000451859 ALMS1Q8TCU4 4167 aa6.47□□□□□ -1.37
RFX3-209ENST00000451859 A0A0B4J293 547 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 IGHV3-66A0A0C4DH42 116 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 TEX13DA0A0J9YY54 714 aaPredicted RBP6.46□□□□□ -1.38
RFX3-209ENST00000451859 DISC1C4P0D8 188 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 CD74P04233 296 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 OR5AC1P0C628 307 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 RPL35AP18077 110 aaKnown RBP6.46□□□□□ -1.38
RFX3-209ENST00000451859 RELQ04864 619 aaPredicted RBP6.46□□□□□ -1.38
RFX3-209ENST00000451859 GBGT1Q8N5D6 347 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms