RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 AREGP15514 252 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 CD1BP29016 333 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 OPRK1P41145 380 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 PSG5Q15238 335 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 ANKRD39Q53RE8 183 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 C1orf122Q6ZSJ8 110 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 CLRN3Q8NCR9 226 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 TMEM37Q8WXS4 190 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 NEIL1Q96FI4 390 aaPredicted RBP5.23□□□□□ -1.57
USP46-202ENST00000451218 SIGLEC9Q9Y336 463 aa5.23□□□□□ -1.57
USP46-202ENST00000451218 CLEC3BP05452 202 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 COMPP49747 757 aaPredicted RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 TPTE2P1Q5T6R2 138 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 THAP8Q8NA92 274 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 GCN1Q92616 2671 aaKnown RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 AMY1AP04745 511 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 ATP6V1FQ16864 119 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 ZNF343Q6P1L6 599 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 CYB561D1Q8N8Q1 229 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 SLC24A4Q8NFF2 622 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 OR4C13Q8NGP0 309 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 OR5B3Q8NH48 314 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 SCGB1C1Q8TD33 95 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 H1FXQ92522 213 aaKnown RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 MIOXQ9UGB7 285 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 NIPBLQ6KC79 2804 aaeCLIP5.22□□□□□ -1.57
USP46-202ENST00000451218 IGHV3-72A0A0B4J1Y9 119 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 HSPB1P04792 205 aaKnown RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 PRTN3P24158 256 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 PRSS8Q16651 343 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 VMO1Q7Z5L0 202 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 NRGNQ92686 78 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 SSBP3Q9BWW4 388 aaPredicted RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 BPESC1Q9GZL8 116 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 IGHV2-70DA0A0C4DH43 119 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 F6UZH7 168 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 OPN1MWP04001 364 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 OPN1MW2P0DN77 364 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 OPN1MW3P0DN78 364 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 TLE4Q04727 773 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 TMEM88Q6PEY1 159 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 HARBI1Q96MB7 349 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 PIMREGQ9BSJ6 248 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 AP5S1Q9NUS5 200 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 GAR1Q9NY12 217 aaKnown RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 WASHC3Q9Y3C0 194 aa5.22□□□□□ -1.57
USP46-202ENST00000451218 SOX21Q9Y651 276 aaPredicted RBP5.22□□□□□ -1.57
USP46-202ENST00000451218 I3L2K1 104 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 APOC3P02656 99 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 MYCNOSP40205 109 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 ODF1Q14990 250 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 Q71RC1 249 aaPredicted RBP5.21□□□□□ -1.57
USP46-202ENST00000451218 CIB3Q96Q77 187 aaPredicted RBP5.21□□□□□ -1.57
USP46-202ENST00000451218 SSX3Q99909 188 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 CLEC7AQ9BXN2 247 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 RAB1BQ9H0U4 201 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 YTHDF2Q9Y5A9 579 aaKnown RBP5.21□□□□□ -1.57
USP46-202ENST00000451218 EPG5Q9HCE0 2579 aa5.21□□□□□ -1.57
USP46-202ENST00000451218 SPTA1P02549 2419 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 STAG3L2P0CL84 134 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 STAG3L3P0CL85 134 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 BCL2P10415 239 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 FGF7P21781 194 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 EFNA4P52798 201 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 KRTAP10-9P60411 292 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 PLEKHA3Q9HB20 300 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 PRNDQ9UKY0 176 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 SPTBN1Q01082 2364 aaKnown RBP5.21□□□□□ -1.58
USP46-202ENST00000451218 CEACAM3P40198 252 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 PAX8Q06710 450 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 AWAT1Q58HT5 328 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 BCL6BQ8N143 479 aaPredicted RBP5.21□□□□□ -1.58
USP46-202ENST00000451218 OR2T6Q8NHC8 308 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 LHX4Q969G2 390 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 SLC25A2Q9BXI2 301 aa5.21□□□□□ -1.58
USP46-202ENST00000451218 TIMM23O14925 209 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 AVPP01185 164 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 IFNA4P05014 189 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 RPL29P47914 159 aaKnown RBP5.2□□□□□ -1.58
USP46-202ENST00000451218 HBG1P69891 147 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 HBG2P69892 147 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 CD69Q07108 199 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 ZNF616Q08AN1 781 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 HNF4GQ14541 408 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 FAM120AOSQ5T036 256 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 MIC13Q5XKP0 118 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 TEX45Q8NA69 505 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 SLC35B3Q9H1N7 401 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 SMDT1Q9H4I9 107 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 C1RLQ9NZP8 487 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 MYO18BQ8IUG5 2567 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 IGHV4-61A0A0C4DH41 118 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 A0A1B0GV50 99 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 ZNF785A8K8V0 405 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 FOLR2P14207 255 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 NPY1RP25929 384 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 BRS3P32247 399 aa5.2□□□□□ -1.58
USP46-202ENST00000451218 RPL8P62917 257 aaKnown RBP5.2□□□□□ -1.58
USP46-202ENST00000451218 ZNF600Q6ZNG1 722 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms