RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	PRRT1	Q99946	306 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	SRD5A3	Q9H8P0	318 aa		12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	C14orf166	Q9Y224	244 aa	Known RBP	12.02	□□□□□ -0.49
SGCE-208	ENST00000450385	RBMY1B	A6NDE4	496 aa	Known RBP	12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	RBMY1E	A6NEQ0	496 aa	Known RBP	12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	CTDSP2	O14595	271 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	NOL3	O60936	208 aa	Known RBP	12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	CDS2	O95674	445 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	RBMY1D	P0C7P1	496 aa	Known RBP	12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	AKAIN1	P0CW23	69 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	BMI1	P35226	326 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	NPBWR1	P48145	328 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	SPCS2	Q15005	226 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	AARD	Q4LEZ3	155 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	PVRIG	Q6DKI7	326 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	OR52E5	Q8NH55	327 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	CHRDL1	Q9BU40	450 aa		12.01	□□□□□ -0.49
SGCE-208	ENST00000450385	NXF2	Q9GZY0	626 aa	Known RBP	12.01	□□□□□ -0.49
SGCE-208	ENST00000450385		A0A0B4J293	547 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	GSTZ1	O43708	216 aa	Predicted RBP	12	□□□□□ -0.49
SGCE-208	ENST00000450385	SCGB2A1	O75556	95 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	IFNA17	P01571	189 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	IGKV1-5	P01602	117 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	ADM	P35318	185 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	TRIM16L	Q309B1	348 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	SCGB2B2	Q4G0G5	96 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	SLC35G3	Q8N808	338 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	UBAC2	Q8NBM4	344 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	DUSP18	Q8NEJ0	188 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	OR13C8	Q8NGS7	320 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	MISP3	Q96FF7	219 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	TMEM222	Q9H0R3	208 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	ENY2	Q9NPA8	101 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	SCP2D1	Q9UJQ7	156 aa		12	□□□□□ -0.49
SGCE-208	ENST00000450385	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	IGHV3-35	A0A0C4DH35	117 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	OR4C46	A6NHA9	309 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	UBE2C	O00762	179 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	GNG7	O60262	68 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	SCAF4	O95104	1147 aa	Known RBP	11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	MT-CO2	P00403	227 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	PI3	P19957	117 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	EDN2	P20800	178 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	SPCS3	P61009	180 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	IL18	Q14116	193 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	OR4D10	Q8NGI6	311 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	MARCH1	Q8TCQ1	289 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	GINS3	Q9BRX5	216 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	GGTLC1	Q9BX51	225 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	SMPX	Q9UHP9	88 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	GPR132	Q9UNW8	380 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	KCNIP3	Q9Y2W7	256 aa		11.99	□□□□□ -0.49
SGCE-208	ENST00000450385	ST8SIA3	O43173	380 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	PPP5C	P53041	499 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	RNASE12	Q5GAN4	147 aa	Known RBP	11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	GLYATL2	Q8WU03	294 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	DEDD2	Q8WXF8	326 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	RBPMS	Q93062	196 aa	Known RBP	11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	C20orf24	Q9BUV8	137 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	TP53TG1	Q9Y2A0	90 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	LYST	Q99698	3801 aa		11.98	□□□□□ -0.49
SGCE-208	ENST00000450385	TRAV14DV4	A0A0A6YYC5	116 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	KIR2DL5B	A0A0G2JN68	375 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	KIR2DL5B	A0A0G2JPC4	375 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	ANKRD20A5P	A0PJZ0	165 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	APOC4	P55056	127 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	PAFAH1B2	P68402	229 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	NOXA1	Q86UR1	476 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	KIR2DL5A	Q8N109	375 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	TMEM116	Q8NCL8	245 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	KIR2DL5B	Q8NHK3	375 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	RNASE11	Q8TAA1	199 aa	Known RBP	11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	IL22RA2	Q969J5	263 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	GALNT14	Q96FL9	552 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	SOST	Q9BQB4	213 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	NAA60	Q9H7X0	242 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	TMEM56-RWDD3	S4R434	201 aa		11.97	□□□□□ -0.49
SGCE-208	ENST00000450385	TRAV30	A0A087WSZ9	112 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	IGHV3-21	A0A0B4J1V1	117 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	IGHV7-4-1	A0A0J9YVY3	117 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	CRYM-AS1	A6NIL9	109 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	HTR2B	P41595	481 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	SP6	Q3SY56	376 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385		Q6ZWC4	215 aa		11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	SLIRP	Q9GZT3	109 aa	Known RBP	11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.96	□□□□□ -0.49
SGCE-208	ENST00000450385	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	FABP12	A6NFH5	140 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385		H3BMQ9	156 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	CHEK1	O14757	476 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	YIF1A	O95070	293 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	BSX	Q3C1V8	233 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	ZNF600	Q6ZNG1	722 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	WFDC3	Q8IUB2	231 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	OR4C16	Q8NGL9	310 aa		11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	PINX1	Q96BK5	328 aa	Known RBP	11.95	□□□□□ -0.5
SGCE-208	ENST00000450385	RHPN1-AS1	Q9BWJ2	59 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms