RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 C14orf166Q9Y224 244 aaKnown RBP16.39■□□□□ 0.21
CPSF7-208ENST00000450000 I3L2K1 104 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 HOXA1P49639 335 aaPredicted RBP16.38■□□□□ 0.21
CPSF7-208ENST00000450000 MRPS10P82664 201 aaKnown RBP16.38■□□□□ 0.21
CPSF7-208ENST00000450000 STEAP1BQ6NZ63 245 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 LHFPL1Q86WI0 220 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 TP53RKQ96S44 253 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 ABHD1Q96SE0 405 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 GINS3Q9BRX5 216 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 SMPXQ9UHP9 88 aa16.38■□□□□ 0.21
CPSF7-208ENST00000450000 TRAV14DV4A0A0A6YYC5 116 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 F8W735 103 aaPredicted RBP16.37■□□□□ 0.21
CPSF7-208ENST00000450000 GABARAPH6UMI1 98 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 SCGB2A1O75556 95 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 B3GALNT1O75752 331 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 IGHV3-48P01763 117 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 CTSDP07339 412 aaPredicted RBP16.37■□□□□ 0.21
CPSF7-208ENST00000450000 FCGR2BP31994 310 aaPredicted RBP16.37■□□□□ 0.21
CPSF7-208ENST00000450000 CMC4P56277 68 aaPredicted RBP16.37■□□□□ 0.21
CPSF7-208ENST00000450000 MEF2DQ14814 521 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 IZUMO4Q1ZYL8 232 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 RHPN1-AS1Q9BWJ2 59 aa16.37■□□□□ 0.21
CPSF7-208ENST00000450000 DNAH7Q8WXX0 4024 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 IGHV7-4-1A0A0J9YVY3 117 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 DISC1C4P0D8 188 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 CORTO00230 105 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 PAFAH1B2P68402 229 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 SSBP1Q04837 148 aaKnown RBP16.36■□□□□ 0.21
CPSF7-208ENST00000450000 SP6Q3SY56 376 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 STPG3Q8N7X2 389 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 OR13C8Q8NGS7 320 aa16.36■□□□□ 0.21
CPSF7-208ENST00000450000 NXF2Q9GZY0 626 aaKnown RBP16.36■□□□□ 0.21
CPSF7-208ENST00000450000 IGKV3-7A0A075B6H7 116 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 IGHV3-49A0A0A0MS15 119 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 TEX13DA0A0J9YY54 714 aaPredicted RBP16.35■□□□□ 0.21
CPSF7-208ENST00000450000 UBE2CO00762 179 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 ST8SIA3O43173 380 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 IGKV1-5P01602 117 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 TFPI2P48307 235 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 MARCH1Q8TCQ1 289 aa16.35■□□□□ 0.21
CPSF7-208ENST00000450000 CHEK1O14757 476 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 NOL3O60936 208 aaKnown RBP16.34■□□□□ 0.21
CPSF7-208ENST00000450000 CD74P04233 296 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 ETV6P41212 452 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 IL18Q14116 193 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 CLVS1Q8IUQ0 354 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-208ENST00000450000 OR4D10Q8NGI6 311 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 DIRAS2Q96HU8 199 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 RNF2Q99496 336 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 OVOL2Q9BRP0 275 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 RABL2AQ9UBK7 228 aaPredicted RBP16.34■□□□□ 0.21
CPSF7-208ENST00000450000 RABL2BQ9UNT1 228 aa16.34■□□□□ 0.21
CPSF7-208ENST00000450000 A0A0B4J293 547 aa16.33■□□□□ 0.2
CPSF7-208ENST00000450000 SPRY2O43597 315 aa16.33■□□□□ 0.2
CPSF7-208ENST00000450000 CD5P06127 495 aa16.33■□□□□ 0.2
CPSF7-208ENST00000450000 RPL35AP18077 110 aaKnown RBP16.33■□□□□ 0.2
CPSF7-208ENST00000450000 Q6ZWC4 215 aa16.33■□□□□ 0.2
CPSF7-208ENST00000450000 GALNT14Q96FL9 552 aa16.33■□□□□ 0.2
CPSF7-208ENST00000450000 CTDSP2O14595 271 aa16.32■□□□□ 0.2
CPSF7-208ENST00000450000 OPRK1P41145 380 aa16.32■□□□□ 0.2
CPSF7-208ENST00000450000 RPL11P62913 178 aaKnown RBP16.32■□□□□ 0.2
CPSF7-208ENST00000450000 OR10C1Q96KK4 312 aa16.32■□□□□ 0.2
CPSF7-208ENST00000450000 MIXL1Q9H2W2 232 aa16.32■□□□□ 0.2
CPSF7-208ENST00000450000 TMEM231Q9H6L2 316 aa16.32■□□□□ 0.2
CPSF7-208ENST00000450000 TP53TG1Q9Y2A0 90 aa16.32■□□□□ 0.2
CPSF7-208ENST00000450000 IGHV3OR16-13A0A075B7E8 117 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 IGHV3-74A0A0B4J1X5 117 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 KIR2DL5BA0A0G2JN68 375 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 KIR2DL5BA0A0G2JPC4 375 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 DNASE2O00115 360 aaPredicted RBP16.31■□□□□ 0.2
CPSF7-208ENST00000450000 AKAIN1P0CW23 69 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 UCP1P25874 307 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 SPCS2Q15005 226 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 DEFB135Q30KP9 77 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 ODF3L2Q3SX64 289 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 ZNF600Q6ZNG1 722 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 FAM219AQ8IW50 185 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 KIR2DL5AQ8N109 375 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 KIR2DL5BQ8NHK3 375 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 RAB2BQ8WUD1 216 aa16.31■□□□□ 0.2
CPSF7-208ENST00000450000 CXorf65A6NEN9 183 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 INS-IGF2F8WCM5 200 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 OR5AC1P0C628 307 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 ALDH3B2P48448 385 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 DHODHQ02127 395 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 FAAP20Q6NZ36 180 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 TOMM20LQ6UXN7 152 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 TCF24Q7RTU0 167 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 WFDC3Q8IUB2 231 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 GBGT1Q8N5D6 347 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 NARS2Q96I59 477 aaKnown RBP16.3■□□□□ 0.2
CPSF7-208ENST00000450000 NAA60Q9H7X0 242 aa16.3■□□□□ 0.2
CPSF7-208ENST00000450000 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.3■□□□□ 0.2
CPSF7-208ENST00000450000 PUS1Q9Y606 427 aaKnown RBP eCLIP16.3■□□□□ 0.2
CPSF7-208ENST00000450000 SPCS3P61009 180 aa16.29■□□□□ 0.2
CPSF7-208ENST00000450000 SURF2Q15527 256 aaPredicted RBP16.29■□□□□ 0.2
CPSF7-208ENST00000450000 APRG1Q8IVJ8 170 aa16.29■□□□□ 0.2
CPSF7-208ENST00000450000 SMIM4Q8WVI0 70 aa16.29■□□□□ 0.2
CPSF7-208ENST00000450000 TMEM230Q96A57 120 aa16.29■□□□□ 0.2
CPSF7-208ENST00000450000 PRRT1Q99946 306 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms