RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ESRGQ1W209 222 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 TIMM50Q3ZCQ8 353 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 OR2B11Q5JQS5 317 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 OR10K2Q6IF99 312 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 RPL22L1Q6P5R6 122 aaKnown RBP5.34□□□□□ -1.55
LINC01961-201ENST00000449954 TOMM20LQ6UXN7 152 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 LHFPL3Q86UP9 236 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 RXFP4Q8TDU9 374 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 NARS2Q96I59 477 aaKnown RBP5.34□□□□□ -1.55
LINC01961-201ENST00000449954 UHRF2Q96PU4 802 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 C7orf50Q9BRJ6 194 aaKnown RBP5.34□□□□□ -1.55
LINC01961-201ENST00000449954 GINS4Q9BRT9 223 aa5.34□□□□□ -1.55
LINC01961-201ENST00000449954 SEPSECSQ9HD40 501 aaKnown RBP5.34□□□□□ -1.55
LINC01961-201ENST00000449954 hCG_2014768A0A024R1R8 64 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 TRBV5-5A0A0J9YX44 114 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 SNTNA6NMZ2 147 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 H3BNG1 76 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 RAB27BO00194 218 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 SLC22A5O76082 557 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 CD3GP09693 182 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 M6PRP20645 277 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 NPPCP23582 126 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 P2RY1P47900 373 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 GTF2A1P52655 376 aaPredicted RBP5.33□□□□□ -1.56
LINC01961-201ENST00000449954 MFAP4P55083 255 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 WT1-ASQ06250 92 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 Q499Y3 187 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 IGSF11Q5DX21 431 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 LELP1Q5T871 98 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 CADM3Q8N126 398 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 ZNF709Q8N972 641 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 CANT1Q8WVQ1 401 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 TRUB1Q8WWH5 349 aaKnown RBP5.33□□□□□ -1.56
LINC01961-201ENST00000449954 SMIM19Q96E16 107 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 HSD17B10Q99714 261 aaKnown RBP5.33□□□□□ -1.56
LINC01961-201ENST00000449954 CMSS1Q9BQ75 279 aaKnown RBP5.33□□□□□ -1.56
LINC01961-201ENST00000449954 CENPOQ9BU64 300 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 HRASLSQ9HDD0 168 aa5.33□□□□□ -1.56
LINC01961-201ENST00000449954 GNG7O60262 68 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 TSPOP30536 169 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 NKX2-1P43699 371 aaPredicted RBP5.32□□□□□ -1.56
LINC01961-201ENST00000449954 AP2S1P53680 142 aaPredicted RBP5.32□□□□□ -1.56
LINC01961-201ENST00000449954 GYS2P54840 703 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 NHLH2Q02577 135 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 YIF1BQ5BJH7 314 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 MEDAGQ5VYS4 303 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 KDM4DQ6B0I6 523 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 ZNF600Q6ZNG1 722 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 C1orf158Q8N1D5 194 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 OR10W1Q8NGF6 305 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 TCTEX1D2Q8WW35 142 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 FCGR1BQ92637 280 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 LSM10Q969L4 123 aaKnown RBP5.32□□□□□ -1.56
LINC01961-201ENST00000449954 LGALS12Q96DT0 336 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 SLC29A1Q99808 456 aa5.32□□□□□ -1.56
LINC01961-201ENST00000449954 TRAV26-1A0A087WT03 109 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 K7EP13 123 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 TRAPPC2P0DI81 140 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 TRAPPC2BP0DI82 140 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 DCKP27707 260 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 FXYD7P58549 80 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 RPL30P62888 115 aaKnown RBP5.31□□□□□ -1.56
LINC01961-201ENST00000449954 MRPS15P82914 257 aaKnown RBP5.31□□□□□ -1.56
LINC01961-201ENST00000449954 MS4A2Q01362 244 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 ACSM3Q53FZ2 586 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 H1FOOQ8IZA3 346 aaPredicted RBP5.31□□□□□ -1.56
LINC01961-201ENST00000449954 METTL26Q96S19 204 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 TMEM208Q9BTX3 173 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 RBMX2Q9Y388 322 aaKnown RBP5.31□□□□□ -1.56
LINC01961-201ENST00000449954 TNFRSF18Q9Y5U5 241 aa5.31□□□□□ -1.56
LINC01961-201ENST00000449954 TRAV9-2A0A087WT02 112 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 A0A0A6YYD4 124 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 ERICH4A6NGS2 130 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 AQP12BA6NM10 295 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 UPK2O00526 184 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 TMEM127O75204 238 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 IGKV3-20P01619 116 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 CDK1P06493 297 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 CRYBB3P26998 211 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 UNC119Q13432 240 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 SPATA31B1PQ5VZV4 182 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 XAF1Q6GPH4 301 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 SCXQ7RTU7 201 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 AQP12AQ8IXF9 295 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 OR13F1Q8NGS4 319 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 OR10J6PQ8NGY7 276 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 OR1P1Q8NH06 330 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 SLC25A46Q96AG3 418 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 URM1Q9BTM9 101 aaKnown RBP5.3□□□□□ -1.56
LINC01961-201ENST00000449954 GABARAPL3Q9BY60 117 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 TAGLN3Q9UI15 199 aa5.3□□□□□ -1.56
LINC01961-201ENST00000449954 TMEM14DPA8MWL7 114 aa5.29□□□□□ -1.56
LINC01961-201ENST00000449954 B5MCH6 92 aa5.29□□□□□ -1.56
LINC01961-201ENST00000449954 I3L2K1 104 aa5.29□□□□□ -1.56
LINC01961-201ENST00000449954 M0QYG6 137 aa5.29□□□□□ -1.56
LINC01961-201ENST00000449954 SOCS1O15524 211 aa5.29□□□□□ -1.56
LINC01961-201ENST00000449954 FKBP6O75344 327 aa5.29□□□□□ -1.56
LINC01961-201ENST00000449954 FCGR3AP08637 254 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms