RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 FAM110AQ9BQ89 295 aa12.97□□□□□ -0.33
CLTCL1-203ENST00000449918 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
CLTCL1-203ENST00000449918 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
CLTCL1-203ENST00000449918 A0A0B4J293 547 aa12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 YIF1AO95070 293 aa12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 CTSDP07339 412 aaPredicted RBP12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 SUB1P53999 127 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 IZUMO4Q1ZYL8 232 aa12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 SP6Q3SY56 376 aa12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 CLVS1Q8IUQ0 354 aaPredicted RBP12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 SLC35G3Q8N808 338 aa12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 C14orf166Q9Y224 244 aaKnown RBP12.96□□□□□ -0.33
CLTCL1-203ENST00000449918 IGHV3OR16-8A0A075B7F1 116 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 DISC1C4P0D8 188 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 INS-IGF2F8WCM5 200 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 ZNF207O43670 478 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 GNG7O60262 68 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 P0C879 139 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 TMBIM6P55061 237 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 SPINK9Q5DT21 86 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 DUSP18Q8NEJ0 188 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 RNASE11Q8TAA1 199 aaKnown RBP12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 DIRAS2Q96HU8 199 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 ENY2Q9NPA8 101 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 SMPXQ9UHP9 88 aa12.95□□□□□ -0.34
CLTCL1-203ENST00000449918 OR4C46A6NHA9 309 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 CORTO00230 105 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 CTDSPLO15194 276 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 IGHV3-48P01763 117 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 UCP1P25874 307 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 NPBWR1P48145 328 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 IL18Q14116 193 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 SMIM4Q8WVI0 70 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 OR10C1Q96KK4 312 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 CCDC59Q9P031 241 aaKnown RBP12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 RYR3Q15413 4870 aa12.94□□□□□ -0.34
CLTCL1-203ENST00000449918 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 IGHV7-4-1A0A0J9YVY3 117 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 TEX13DA0A0J9YY54 714 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 AKAIN1P0CW23 69 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 APOC4P55056 127 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 SURF2Q15527 256 aaPredicted RBP12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 FAM219AQ8IW50 185 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 DYNC2LI1Q8TCX1 351 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 RHPN1-AS1Q9BWJ2 59 aa12.93□□□□□ -0.34
CLTCL1-203ENST00000449918 LCE6AA0A183 80 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 CHEK1O14757 476 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 NOL3O60936 208 aaKnown RBP12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 CDS2O95674 445 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 BMI1P35226 326 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 ETV6P41212 452 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 HOXA1P49639 335 aaPredicted RBP12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 CMC4P56277 68 aaPredicted RBP12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 FAAP20Q6NZ36 180 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 RNF2Q99496 336 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 GINS3Q9BRX5 216 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 RTBDNQ9BSG5 229 aaPredicted RBP12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 TMEM222Q9H0R3 208 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 UBQLN2Q9UHD9 624 aa12.92□□□□□ -0.34
CLTCL1-203ENST00000449918 DNAH7Q8WXX0 4024 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 UBE2CO00762 179 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 OR5AC1P0C628 307 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 DHODHQ02127 395 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 PRRT1Q99946 306 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 C6orf62Q9GZU0 229 aaPredicted RBP12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 RSL24D1Q9UHA3 163 aaKnown RBP12.91□□□□□ -0.34
CLTCL1-203ENST00000449918 SCGB2A1O75556 95 aa12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 CD5P06127 495 aa12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 RPL5P46777 297 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 SPCS3P61009 180 aa12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 OR52E5Q8NH55 327 aa12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 RBPMSQ93062 196 aaKnown RBP12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
CLTCL1-203ENST00000449918 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 KIR2DL5BA0A0G2JN68 375 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 KIR2DL5BA0A0G2JPC4 375 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 GSTZ1O43708 216 aaPredicted RBP12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 TMEM50AO95807 157 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 PAFAH1B2P68402 229 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 TOMM20LQ6UXN7 152 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 ZNF600Q6ZNG1 722 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 Q6ZWC4 215 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 KIR2DL5AQ8N109 375 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 OR4C16Q8NGL9 310 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 KIR2DL5BQ8NHK3 375 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 SCGB3A2Q96PL1 93 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 CACFD1Q9UGQ2 172 aa12.89□□□□□ -0.35
CLTCL1-203ENST00000449918 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms