RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 C18orf12Q96KH6 178 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 PRELID3AQ96N28 172 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 Q0VFX4 171 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 MDS2Q8NDY4 140 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 GPR61Q9BZJ8 451 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 CACNA1IQ9P0X4 2223 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 A0A1B0GW15 77 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 CYB5R2Q6BCY4 276 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 GTSCR1Q86UQ5 136 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 SOX21Q9Y651 276 aaPredicted RBP8.49□□□□□ -1.05
SCN10A-201ENST00000449082 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 TFF1P04155 84 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 NSUN5P1Q3KNT7 163 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 RNF125Q96EQ8 232 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 RPP21Q9H633 154 aaKnown RBP8.49□□□□□ -1.05
SCN10A-201ENST00000449082 IL36BQ9NZH7 164 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 IGKV1D-13A0A0B4J2D9 117 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 A0A0G2JNJ9 132 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 IGKV1-13P0DP09 117 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 ZP1P60852 638 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 COL5A1-AS1Q5SY13 56 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 ZNF525Q8N782 197 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 Q9UFV3 132 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 MSRB2Q9Y3D2 182 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 SLC25A15Q9Y619 301 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 FAM186AA6NE01 2351 aa8.49□□□□□ -1.05
SCN10A-201ENST00000449082 RALGAPA1Q6GYQ0 2036 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 EFNA2O43921 213 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 FAM166AQ6J272 317 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 LRTM2Q8N967 370 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 FER1L6-AS1Q8NA97 138 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 NEUROG3Q9Y4Z2 214 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 B4DSR2 109 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
SCN10A-201ENST00000449082 SLC25A34Q6PIV7 304 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 VMO1Q7Z5L0 202 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 SLC25A28Q96A46 364 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 SRRM5B3KS81 715 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 FABP2P12104 132 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 FAM89BQ8N5H3 189 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 OR13C6PQ8NH95 151 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 ASCL2Q99929 193 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 TMEM8BA6NDV4 472 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 BIVMQ86UB2 503 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 DICER1Q9UPY3 1922 aaKnown RBP8.48□□□□□ -1.05
SCN10A-201ENST00000449082 DUTP33316 252 aaKnown RBP8.48□□□□□ -1.05
SCN10A-201ENST00000449082 PRCDQ00LT1 54 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 ZNF319Q9P2F9 582 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 UQCR10Q9UDW1 63 aa8.48□□□□□ -1.05
SCN10A-201ENST00000449082 IGHV2-26A0A0B4J1V2 119 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 H3BRM9 83 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 TMEM178BH3BS89 294 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 ZNF362Q5T0B9 420 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 ZNF324BQ6AW86 544 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 ARL6IP6Q8N6S5 226 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 OTX1P32242 354 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 HINT1P49773 126 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 MINOS1Q5TGZ0 78 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 MINOS1-NBL1R4GNA1 71 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 FABP5P3A8MUU1 101 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 ATP5LO75964 103 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 FOXG1P55316 489 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 Q6ZS92 163 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 NABP1Q96AH0 204 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 HEATR5BQ9P2D3 2071 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 MBD3L4A6NDZ8 208 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 MBD3L3A6NE82 208 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 MBD3L5A6NJ08 208 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 RAMP3O60896 148 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 PAX8Q06710 450 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 MBD3L2Q8NHZ7 208 aaPredicted RBP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 ZNF257Q9Y2Q1 563 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 OOSP1A8MZH6 123 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 CD7P09564 240 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 SRSF7Q16629 238 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCN10A-201ENST00000449082 GCSAMLQ5JQS6 135 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 ZNF414Q96IQ9 312 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 TMEM160Q9NX00 188 aa8.47□□□□□ -1.05
SCN10A-201ENST00000449082 FAM71F2Q6NXP2 309 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 SCGB3A1Q96QR1 104 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 SDHCQ99643 169 aaPredicted RBP8.46□□□□□ -1.05
SCN10A-201ENST00000449082 RPUSD1Q9UJJ7 312 aaKnown RBP8.46□□□□□ -1.05
SCN10A-201ENST00000449082 GRIFINA4D1Z8 144 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 OR11H12B2RN74 326 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 CBLN1P23435 193 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 ATP5G3P48201 142 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 OR11H1Q8NG94 326 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 OR11H2Q8NH07 326 aa8.46□□□□□ -1.05
SCN10A-201ENST00000449082 TMEM200BQ69YZ2 307 aa8.46□□□□□ -1.06
SCN10A-201ENST00000449082 MDC1Q14676 2089 aaKnown RBP8.46□□□□□ -1.06
SCN10A-201ENST00000449082 MPTX1A8MV57 137 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms