RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MT-CO2P00403 227 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 IGKV1-5P01602 117 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 CTSGP08311 255 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 SPCS2Q15005 226 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 SPINK9Q5DT21 86 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 RAB2BQ8WUD1 216 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 RRNAD1Q96FB5 475 aaKnown RBP14.73□□□□□ -0.05
VCP-203ENST00000448530 C14orf166Q9Y224 244 aaKnown RBP14.73□□□□□ -0.05
VCP-203ENST00000448530 RYR3Q15413 4870 aa14.73□□□□□ -0.05
VCP-203ENST00000448530 GNG7O60262 68 aa14.72□□□□□ -0.05
VCP-203ENST00000448530 B3GALNT1O75752 331 aa14.72□□□□□ -0.05
VCP-203ENST00000448530 SP6Q3SY56 376 aa14.72□□□□□ -0.05
VCP-203ENST00000448530 MARCH1Q8TCQ1 289 aa14.72□□□□□ -0.05
VCP-203ENST00000448530 ENY2Q9NPA8 101 aa14.72□□□□□ -0.05
VCP-203ENST00000448530 OR4C46A6NHA9 309 aa14.71□□□□□ -0.05
VCP-203ENST00000448530 DISC1C4P0D8 188 aa14.71□□□□□ -0.05
VCP-203ENST00000448530 NOL3O60936 208 aaKnown RBP14.71□□□□□ -0.05
VCP-203ENST00000448530 IGHV3-48P01763 117 aa14.71□□□□□ -0.05
VCP-203ENST00000448530 CTSDP07339 412 aaPredicted RBP14.71□□□□□ -0.05
VCP-203ENST00000448530 FCGR2BP31994 310 aaPredicted RBP14.71□□□□□ -0.05
VCP-203ENST00000448530 SUB1P53999 127 aaKnown RBP eCLIP14.71□□□□□ -0.05
VCP-203ENST00000448530 IL18Q14116 193 aa14.71□□□□□ -0.05
VCP-203ENST00000448530 DIRAS2Q96HU8 199 aa14.71□□□□□ -0.05
VCP-203ENST00000448530 RABL2AQ9UBK7 228 aaPredicted RBP14.71□□□□□ -0.05
VCP-203ENST00000448530 RABL2BQ9UNT1 228 aa14.71□□□□□ -0.05
VCP-203ENST00000448530 DNAH7Q8WXX0 4024 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 A0A0B4J293 547 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 TEX13DA0A0J9YY54 714 aaPredicted RBP14.7□□□□□ -0.06
VCP-203ENST00000448530 ST8SIA3O43173 380 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 UCP1P25874 307 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 NPBWR1P48145 328 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 HOXA1P49639 335 aaPredicted RBP14.7□□□□□ -0.06
VCP-203ENST00000448530 DUSP18Q8NEJ0 188 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 SMIM4Q8WVI0 70 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 BCL7BQ9BQE9 202 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 NXF2Q9GZY0 626 aaKnown RBP14.7□□□□□ -0.06
VCP-203ENST00000448530 CCDC59Q9P031 241 aaKnown RBP14.7□□□□□ -0.06
VCP-203ENST00000448530 UBQLN2Q9UHD9 624 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 SMPXQ9UHP9 88 aa14.7□□□□□ -0.06
VCP-203ENST00000448530 P0C879 139 aa14.69□□□□□ -0.06
VCP-203ENST00000448530 AKAIN1P0CW23 69 aa14.69□□□□□ -0.06
VCP-203ENST00000448530 TMBIM6P55061 237 aa14.69□□□□□ -0.06
VCP-203ENST00000448530 FAAP20Q6NZ36 180 aa14.69□□□□□ -0.06
VCP-203ENST00000448530 TMEM116Q8NCL8 245 aa14.69□□□□□ -0.06
VCP-203ENST00000448530 GINS3Q9BRX5 216 aa14.69□□□□□ -0.06
VCP-203ENST00000448530 IGHV7-4-1A0A0J9YVY3 117 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 INS-IGF2F8WCM5 200 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 CORTO00230 105 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 BMI1P35226 326 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 ETV6P41212 452 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 APOC4P55056 127 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 SURF2Q15527 256 aaPredicted RBP14.68□□□□□ -0.06
VCP-203ENST00000448530 RHPN1-AS1Q9BWJ2 59 aa14.68□□□□□ -0.06
VCP-203ENST00000448530 C6orf62Q9GZU0 229 aaPredicted RBP14.68□□□□□ -0.06
VCP-203ENST00000448530 TENM2Q9NT68 2774 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 TRAV14DV4A0A0A6YYC5 116 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 LCE6AA0A183 80 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 CTDSPLO15194 276 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 OR5AC1P0C628 307 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 FAM219AQ8IW50 185 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 DYNC2LI1Q8TCX1 351 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 OR10C1Q96KK4 312 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 PRRT1Q99946 306 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 TMEM222Q9H0R3 208 aa14.67□□□□□ -0.06
VCP-203ENST00000448530 IGHV3-49A0A0A0MS15 119 aa14.66□□□□□ -0.06
VCP-203ENST00000448530 CHEK1O14757 476 aa14.66□□□□□ -0.06
VCP-203ENST00000448530 DHODHQ02127 395 aa14.66□□□□□ -0.06
VCP-203ENST00000448530 OR4C16Q8NGL9 310 aa14.66□□□□□ -0.06
VCP-203ENST00000448530 RNF2Q99496 336 aa14.66□□□□□ -0.06
VCP-203ENST00000448530 NAA60Q9H7X0 242 aa14.66□□□□□ -0.06
VCP-203ENST00000448530 RSL24D1Q9UHA3 163 aaKnown RBP14.66□□□□□ -0.06
VCP-203ENST00000448530 SCGB2A1O75556 95 aa14.65□□□□□ -0.06
VCP-203ENST00000448530 CDS2O95674 445 aa14.65□□□□□ -0.06
VCP-203ENST00000448530 CMC4P56277 68 aaPredicted RBP14.65□□□□□ -0.06
VCP-203ENST00000448530 ODF3L2Q3SX64 289 aa14.65□□□□□ -0.06
VCP-203ENST00000448530 RBPMSQ93062 196 aaKnown RBP14.65□□□□□ -0.06
VCP-203ENST00000448530 OVOL2Q9BRP0 275 aa14.65□□□□□ -0.06
VCP-203ENST00000448530 RTBDNQ9BSG5 229 aaPredicted RBP14.65□□□□□ -0.06
VCP-203ENST00000448530 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.65□□□□□ -0.06
VCP-203ENST00000448530 A0A0G2JRQ6 117 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 UBE2CO00762 179 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 RNASE2P10153 161 aaKnown RBP14.64□□□□□ -0.07
VCP-203ENST00000448530 OPRK1P41145 380 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 RPL5P46777 297 aaKnown RBP14.64□□□□□ -0.07
VCP-203ENST00000448530 TFPI2P48307 235 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 SPCS3P61009 180 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 PAFAH1B2P68402 229 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 ZNF600Q6ZNG1 722 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 GLYATL2Q8WU03 294 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 SCP2D1Q9UJQ7 156 aa14.64□□□□□ -0.07
VCP-203ENST00000448530 IGKV3-7A0A075B6H7 116 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 IGHV3OR16-13A0A075B7E8 117 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 IGHV3-74A0A0B4J1X5 117 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 CD5P06127 495 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 TMEM268Q5VZI3 342 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 TOMM20LQ6UXN7 152 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 Q6ZWC4 215 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 STPG3Q8N7X2 389 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 OR51S1Q8NGJ8 323 aa14.63□□□□□ -0.07
VCP-203ENST00000448530 SCGB3A2Q96PL1 93 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms