RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
HLCS-205ENST00000448340 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
HLCS-205ENST00000448340 FAM209BQ5JX69 171 aa13.64□□□□□ -0.23
HLCS-205ENST00000448340 PVRIGQ6DKI7 326 aa13.64□□□□□ -0.23
HLCS-205ENST00000448340 ZBTB8BQ8NAP8 495 aaPredicted RBP13.64□□□□□ -0.23
HLCS-205ENST00000448340 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
HLCS-205ENST00000448340 RAX2Q96IS3 184 aa13.64□□□□□ -0.23
HLCS-205ENST00000448340 U3KQ87 197 aa13.64□□□□□ -0.23
HLCS-205ENST00000448340 C5orf51A6NDU8 294 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 SYNGR2O43760 224 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 PF4P02776 101 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 HSPB1P04792 205 aaKnown RBP13.63□□□□□ -0.23
HLCS-205ENST00000448340 GSG1LQ6UXU4 331 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 ETV3LQ6ZN32 361 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 SLC24A4Q8NFF2 622 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 OR1N2Q8NGR9 330 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 VN1R17PQ8TDU5 208 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 EEF1AKMT3Q96AZ1 226 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 C2orf50Q96LR7 162 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 CIB3Q96Q77 187 aaPredicted RBP13.63□□□□□ -0.23
HLCS-205ENST00000448340 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
HLCS-205ENST00000448340 GSKIPQ9P0R6 139 aa13.63□□□□□ -0.23
HLCS-205ENST00000448340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
HLCS-205ENST00000448340 TRBV7-1A0A0A6YYK4 115 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 CORTO00230 105 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 SSNA1O43805 119 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 LY86O95711 162 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 ATP5IP56385 69 aaPredicted RBP13.62□□□□□ -0.23
HLCS-205ENST00000448340 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 FHL3Q13643 280 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 C2orf83Q53S99 150 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 MISP3Q96FF7 219 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 MAGT1Q9H0U3 335 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 PEF1Q9UBV8 284 aaKnown RBP13.62□□□□□ -0.23
HLCS-205ENST00000448340 ALG5Q9Y673 324 aa13.62□□□□□ -0.23
HLCS-205ENST00000448340 MFSD2BA6NFX1 497 aa13.61□□□□□ -0.23
HLCS-205ENST00000448340 K7EIM0 57 aa13.61□□□□□ -0.23
HLCS-205ENST00000448340 BEAN1Q3B7T3 259 aa13.61□□□□□ -0.23
HLCS-205ENST00000448340 KPRPQ5T749 579 aaPredicted RBP13.61□□□□□ -0.23
HLCS-205ENST00000448340 DPF1Q92782 380 aa13.61□□□□□ -0.23
HLCS-205ENST00000448340 DUX3Q96PT4 197 aa13.61□□□□□ -0.23
HLCS-205ENST00000448340 IGHV4OR15-8A0A075B7B6 117 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 A0A087WW49 117 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 ANKRD34BA5PLL1 514 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 LINC01619G3V211 115 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 I3L2K1 104 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 WRBO00258 174 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 GOSR2O14653 212 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 IFNA10P01566 189 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 OR8U8P0C7N1 319 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 IAPPP10997 89 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 NPY1RP25929 384 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 POLR2GP62487 172 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLCS-205ENST00000448340 C11orf87Q6NUJ2 197 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 SCARB1Q8WTV0 552 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 ATP6V0BQ99437 205 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 S4R3C0 116 aa13.6□□□□□ -0.23
HLCS-205ENST00000448340 SCGB1D2O95969 90 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 MT-CO2P00403 227 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 TRBV12-3P01733 135 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 IGHV3-23P01764 117 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 MBPP02686 304 aaPredicted RBP13.59□□□□□ -0.23
HLCS-205ENST00000448340 RPP30P78346 268 aaKnown RBP13.59□□□□□ -0.23
HLCS-205ENST00000448340 LINC00482Q8N8I6 264 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 RNASEH2CQ8TDP1 164 aaKnown RBP13.59□□□□□ -0.23
HLCS-205ENST00000448340 TMEM170AQ8WVE7 144 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
HLCS-205ENST00000448340 C21orf62Q9NYP8 219 aa13.59□□□□□ -0.23
HLCS-205ENST00000448340 IGHV3-21A0A0B4J1V1 117 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 G3V4G9 280 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 SSSCA1O60232 199 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 CLEC3BP05452 202 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 ZP3P21754 424 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 IL15RAQ13261 267 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 CLEC19AQ6UXS0 136 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 WFDC9Q8NEX5 89 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 RAB40CQ96S21 281 aa13.58□□□□□ -0.24
HLCS-205ENST00000448340 SIX6O95475 246 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
HLCS-205ENST00000448340 MFAP4P55083 255 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 RAB11AP62491 216 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 CYCSP99999 105 aaKnown RBP13.57□□□□□ -0.24
HLCS-205ENST00000448340 SMIM8Q96KF7 97 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 TXN2Q99757 166 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 NMES1Q9C002 83 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 GAR1Q9NY12 217 aaKnown RBP13.57□□□□□ -0.24
HLCS-205ENST00000448340 MGAT4CQ9UBM8 478 aa13.57□□□□□ -0.24
HLCS-205ENST00000448340 RCL1Q9Y2P8 373 aaKnown RBP13.57□□□□□ -0.24
HLCS-205ENST00000448340 RPS10-NUDT3A0A1W2PQS6 291 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 K7EPK0 472 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 BMPR1BO00238 502 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 IFNA4P05014 189 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 CD33P20138 364 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
HLCS-205ENST00000448340 OPRK1P41145 380 aa13.56□□□□□ -0.24
HLCS-205ENST00000448340 SLURP1P55000 103 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms