RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 OSR1Q8TAX0 266 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-202ENST00000448238 ARHGEF28Q8N1W1 1705 aaKnown RBP7.6□□□□□ -1.19
NIPBL-202ENST00000448238 PPIAL4CA0A0B4J2A2 164 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 VCYO14598 125 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 PPIAL4GP0DN37 164 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 VSIG8P0DPA2 414 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 C1orf220Q5T0J3 134 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 SCN10AQ9Y5Y9 1956 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 CXorf51AA0A1B0GTR3 108 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 CCL21O00585 134 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 ZNF79Q15937 498 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 PIK3C2BO00750 1634 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 A0A0A6YYD4 124 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 TM4SF5O14894 197 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 CCL20P78556 96 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 RCC1LQ96I51 464 aaKnown RBP7.6□□□□□ -1.19
NIPBL-202ENST00000448238 PHF7Q9BWX1 381 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-202ENST00000448238 Q9H3A6 140 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 C21orf62Q9NYP8 219 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 KLHDC2Q9Y2U9 406 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 LHBP01229 141 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 INSL4Q14641 139 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 SLC25A48Q6ZT89 311 aaKnown RBP7.6□□□□□ -1.19
NIPBL-202ENST00000448238 AHRRA9YTQ3 701 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 KIR3DS1Q14943 382 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 PGLYRP1O75594 196 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-202ENST00000448238 PDLIM4P50479 330 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 EGR4Q05215 589 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-202ENST00000448238 TIMM21Q9BVV7 248 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 MROH1Q8NDA8 1641 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 ADGRB2O60241 1585 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-202ENST00000448238 A0A1W2PQF6 199 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 PRSS23O95084 383 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 FUSP35637 526 aaKnown RBP eCLIP7.59□□□□□ -1.19
NIPBL-202ENST00000448238 LILRA3Q8N6C8 439 aaPredicted RBP7.59□□□□□ -1.19
NIPBL-202ENST00000448238 CEACAM5P06731 702 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 FSTP19883 344 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 IFT172Q9UG01 1749 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 NPIPB13A6NJU9 1138 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 ACYP1P07311 99 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 GFERP55789 205 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 LRP10Q7Z4F1 713 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 NEURL4Q96JN8 1562 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 ECM29Q5VYK3 1845 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 NDUFB1O75438 58 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 SYNJ2BPP57105 145 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 OR13A1Q8NGR1 328 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 ARRDC1-AS1Q9H2J1 176 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 LAMB1P07942 1786 aa7.59□□□□□ -1.19
NIPBL-202ENST00000448238 C1QTNF4Q9BXJ3 329 aa7.59□□□□□ -1.2
NIPBL-202ENST00000448238 IGHG2P01859 326 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 CCL8P80075 99 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 RPRMLQ8N4K4 120 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 REG1AP05451 166 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 CCL13Q99616 98 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 ZNF561-AS1K7EIQ3 104 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 IGHV3-64A0A075B6Q5 118 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 TRAV25A0A0B4J276 109 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 TAX1BP3O14907 124 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 FAM27BQ5VT28 67 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 THAP8Q8NA92 274 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 GPR179Q6PRD1 2367 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 CGAP01215 116 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 ZFP36L2P47974 494 aaKnown RBP7.58□□□□□ -1.2
NIPBL-202ENST00000448238 PSG3Q16557 428 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 RFLNAQ6ZTI6 216 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 FAM214BQ7L5A3 538 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 KLK13Q9UKR3 277 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 COL11A1P12107 1806 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-202ENST00000448238 F6UB75 175 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 UBE2CO00762 179 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 OR2H2O95918 312 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 DCAF12L2Q5VW00 463 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 IGKV6D-21A0A0A0MT36 114 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 F8P00451 2351 aa7.58□□□□□ -1.2
NIPBL-202ENST00000448238 H3BTX0 84 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 FOXG1P55316 489 aaPredicted RBP7.57□□□□□ -1.2
NIPBL-202ENST00000448238 ATP5J2P56134 94 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 SMIM2Q9BVW6 85 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 ZNF576Q9H609 170 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 C3P01024 1663 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 IGHV3-72A0A0B4J1Y9 119 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 ZG16O60844 167 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 GUSBP1Q15486 140 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 SPINK14Q6IE38 97 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 V9GYY9 64 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 NUP188Q5SRE5 1749 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 SHISA8B8ZZ34 492 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 COX5BP10606 129 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 CD33P20138 364 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 TMEM144Q7Z5S9 345 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 LY6G5BQ8NDX9 201 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 PATE1Q8WXA2 126 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 FOXQ1Q9C009 403 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
NIPBL-202ENST00000448238 TMEM242Q9NWH2 141 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms