RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TIMM23O14925 209 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 SUB1P53999 127 aaKnown RBP eCLIP7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 CD81P60033 236 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 RHEBQ15382 184 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 TPTE2P1Q5T6R2 138 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 CST9LP1Q5W188 147 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 TEX45Q8NA69 505 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 ABHD5Q8WTS1 349 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 TVP23CQ96ET8 276 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 P2RX4Q99571 388 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 FBXL15Q9H469 300 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 SEPSECSQ9HD40 501 aaKnown RBP7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 DPM3Q9P2X0 92 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 SIGLEC9Q9Y336 463 aa7.66□□□□□ -1.18
COL6A4P1-201ENST00000446690 SPTBN1Q01082 2364 aaKnown RBP7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 CACNA1AO00555 2505 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 A0A1W2PPI3 338 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 SEC14L6B5MCN3 397 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 M0R1W7 72 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 SOX15O60248 233 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 PRTN3P24158 256 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 OR10J1P30954 320 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 ATP5IP56385 69 aaPredicted RBP7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 CD69Q07108 199 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 SSX2Q16385 188 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 PRSS8Q16651 343 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 MRGPRG-AS1Q2M3A8 158 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 BSXQ3C1V8 233 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 FAM90A2PQ658T7 463 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 VMO1Q7Z5L0 202 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 TMEM144Q7Z5S9 345 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 PPP1R27Q86WC6 154 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 C1QL4Q86Z23 238 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 MMD2Q8IY49 270 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 RPUSD4Q96CM3 377 aaKnown RBP7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 SLC35E1Q96K37 410 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 BPESC1Q9GZL8 116 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 PRDM13Q9H4Q3 707 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 KCNIP2Q9NS61 270 aa7.65□□□□□ -1.18
COL6A4P1-201ENST00000446690 IGKV1OR2-108A0A075B7D4 117 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 ARL14EPLP0DKL9 152 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 MAS1LP35410 378 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 CEACAM3P40198 252 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 RPL27AP46776 148 aaKnown RBP7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 CDX1P47902 265 aaPredicted RBP7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 RPL29P47914 159 aaKnown RBP7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 KIAA0141Q14154 515 aaPredicted RBP7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 HES1Q14469 280 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 SPATA31B1PQ5VZV4 182 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 OR11H6Q8NGC7 330 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 MISP3Q96FF7 219 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 FNDC10F2Z333 226 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 FCN1O00602 326 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 FOXH1O75593 365 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 OR2C1O95371 312 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 AREGP15514 252 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 RHOBP62745 196 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 MMDQ15546 238 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 FAM78BQ5VT40 261 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 C19orf35Q6ZS72 473 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 LPAR2Q9HBW0 351 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 SLC45A2Q9UMX9 530 aa7.64□□□□□ -1.19
COL6A4P1-201ENST00000446690 IGHV3-21A0A0B4J1V1 117 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 C11orf94C9JXX5 98 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 CNIH1O95406 144 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 CXorf1O96002 111 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 CRYGBP07316 175 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 LINC00869P0C866 280 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 LGALS4P56470 323 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 SSBP2P81877 361 aaPredicted RBP7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 PMS2P11Q13670 270 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 SPNS3Q6ZMD2 512 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 NPIPB3Q92617 1050 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 FNDC4Q9H6D8 234 aaPredicted RBP7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 TACC2O95359 2948 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 ARHGAP32A7KAX9 2087 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 INS-IGF2F8WCM5 200 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 VENTXO95231 258 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 STAG3L2P0CL84 134 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 STAG3L3P0CL85 134 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 S100A2P29034 98 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 COMPP49747 757 aaPredicted RBP7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 PRR20EP86478 221 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 PRR20CP86479 221 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 PRR20DP86480 221 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 PRR20BP86481 221 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 PRR20AP86496 221 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 REC114Q7Z4M0 266 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 CACNG8Q8WXS5 425 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 SMIM7Q9BQ49 75 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 GAR1Q9NY12 217 aaKnown RBP7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 TNCP24821 2201 aa7.63□□□□□ -1.19
COL6A4P1-201ENST00000446690 IGLC7A0M8Q6 106 aa7.62□□□□□ -1.19
COL6A4P1-201ENST00000446690 CXorf65A6NEN9 183 aa7.62□□□□□ -1.19
COL6A4P1-201ENST00000446690 HIST1H1BP16401 226 aaKnown RBP7.62□□□□□ -1.19
COL6A4P1-201ENST00000446690 ATP5G3P48201 142 aa7.62□□□□□ -1.19
COL6A4P1-201ENST00000446690 TAS2R60P59551 318 aa7.62□□□□□ -1.19
COL6A4P1-201ENST00000446690 MIR17HGQ75NE6 70 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms