RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 E9PQ18 207 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 DANCRP0C864 163 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 CLEC19AQ6UXS0 136 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 CD8AP01732 235 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
PTPN3-204ENST00000446349 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 PAX8Q06710 450 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 CFAP161Q6P656 301 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 CGB1A6NKQ9 187 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 FOXI3A8MTJ6 420 aaPredicted RBP7.15□□□□□ -1.26
PTPN3-204ENST00000446349 TMEM178BH3BS89 294 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 ICAM4Q14773 271 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 RFLNBQ8N5W9 214 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 SLC25A38Q96DW6 304 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 PRR13Q9NZ81 148 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 SLC25A15Q9Y619 301 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 FABP5P3A8MUU1 101 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 IGHV1-46P01743 117 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 IGHV3OR16-10A0A075B7F0 116 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF688P0C7X2 276 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 GNLYP22749 145 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 LRRK1Q38SD2 2015 aa7.15□□□□□ -1.26
PTPN3-204ENST00000446349 CRYBA2P53672 197 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 C2orf68Q2NKX9 166 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 RPL39P5Q59GN2 51 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 C3orf56Q8N813 242 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 LEAP2Q969E1 77 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 NUDT11Q96G61 164 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 F2Z2F3 143 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 IGFBP3P17936 291 aaPredicted RBP7.15□□□□□ -1.27
PTPN3-204ENST00000446349 SFRP2Q96HF1 295 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 TRBV20OR9-2A0A075B6H5 130 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 TRAV41A0A0B4J266 112 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 A0A1B0GUT8 65 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 CRPP02741 224 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 CD33P20138 364 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 AGAP20933 346 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 VN1R17PQ8TDU5 208 aa7.15□□□□□ -1.27
PTPN3-204ENST00000446349 PPBPP02775 128 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 CRYGSP22914 178 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 PGLYRP4Q96LB8 373 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 OR5AC2Q9NZP5 309 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 PLXNA4Q9HCM2 1894 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 TRAV40A0A0B4J280 105 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 IGKV3-15P01624 115 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 NPCDR1Q9BY65 106 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 NRN1Q9NPD7 142 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 PEX7O00628 323 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 RHOGP84095 191 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 WFIKKN1Q96NZ8 548 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
PTPN3-204ENST00000446349 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
PTPN3-204ENST00000446349 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
PTPN3-204ENST00000446349 RBMY1A1P0DJD3 496 aaKnown RBP7.14□□□□□ -1.27
PTPN3-204ENST00000446349 RBMY1CP0DJD4 496 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 OR1P1Q8NH06 330 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 GTF3C1Q12789 2109 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 DIRC3C9JPN6 131 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 PRCDQ00LT1 54 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 PEAR1Q5VY43 1037 aaPredicted RBP7.14□□□□□ -1.27
PTPN3-204ENST00000446349 KIAA1671Q9BY89 1806 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 DOCK9Q9BZ29 2069 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 DOPEY2Q9Y3R5 2298 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 TGFBR3LH3BV60 316 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 PIN1P1O15428 100 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 SNRPEP62304 92 aaKnown RBP7.14□□□□□ -1.27
PTPN3-204ENST00000446349 HAPLN4Q86UW8 402 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 A0A0G2JNJ9 132 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 ZNF880Q6PDB4 577 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 GGNQ86UU5 652 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 Q9UFV3 132 aa7.14□□□□□ -1.27
PTPN3-204ENST00000446349 TNFSF13O75888 250 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 MALP21145 153 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 NCMAPQ5T1S8 102 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 SAA2-SAA4A0A096LPE2 208 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 SAA2P0DJI9 122 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-204ENST00000446349 FAM74A4Q5TZK3 123 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 SLC25A20O43772 301 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 CRYBB3P26998 211 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 NEUROG1Q92886 237 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 RNF125Q96EQ8 232 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 C1QTNF9BB2RNN3 333 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 UBE2DNLQ8IWF7 75 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 RPUSD1Q9UJJ7 312 aaKnown RBP7.13□□□□□ -1.27
PTPN3-204ENST00000446349 SAA1P0DJI8 122 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-204ENST00000446349 ITGB1BP1O14713 200 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 LMX1BO60663 402 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 RAMP1O60894 148 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 PLAUP00749 431 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 TPTE2P1Q5T6R2 138 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 TP53RKQ96S44 253 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 DEPPQ9NTK1 212 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 A0A1B0GTI1 187 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 ZNF250P15622 560 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 MPZP25189 248 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 IGF2-ASQ6U949 168 aa7.13□□□□□ -1.27
PTPN3-204ENST00000446349 MRPL18Q9H0U6 180 aaKnown RBP7.13□□□□□ -1.27
PTPN3-204ENST00000446349 IGHV2-26A0A0B4J1V2 119 aa7.12□□□□□ -1.27
PTPN3-204ENST00000446349 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms