RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 DNAH1Q9P2D7 4330 aa8.75□□□□□ -1.01
TTC28-203ENST00000442232 IGKV3-7A0A075B6H7 116 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 TRAV14DV4A0A0A6YYC5 116 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 DBX1A6NMT0 343 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 F8W735 103 aaPredicted RBP8.74□□□□□ -1.01
TTC28-203ENST00000442232 I3L2K1 104 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 CD5P06127 495 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 ELK1P19419 428 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 TFPI2P48307 235 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 HOXA1P49639 335 aaPredicted RBP8.74□□□□□ -1.01
TTC28-203ENST00000442232 SUB1P53999 127 aaKnown RBP eCLIP8.74□□□□□ -1.01
TTC28-203ENST00000442232 TRIM16LQ309B1 348 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 CCDC71LQ8N9Z2 235 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 DUSP18Q8NEJ0 188 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 C15orf40Q8WUR7 153 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 RNF2Q99496 336 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 NXF2Q9GZY0 626 aaKnown RBP8.74□□□□□ -1.01
TTC28-203ENST00000442232 TMEM231Q9H6L2 316 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 COPZ2Q9P299 210 aa8.74□□□□□ -1.01
TTC28-203ENST00000442232 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
TTC28-203ENST00000442232 IGHV3-49A0A0A0MS15 119 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 CORTO00230 105 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 CHEK1O14757 476 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 IFNA17P01571 189 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 TBPP20226 339 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 PIGPP57054 158 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 RND3P61587 244 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 SPINK9Q5DT21 86 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 ARRDC1Q8N5I2 433 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 ZFAND1Q8TCF1 268 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 RNF183Q96D59 192 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 OR10C1Q96KK4 312 aa8.73□□□□□ -1.01
TTC28-203ENST00000442232 DNASE2O00115 360 aaPredicted RBP8.72□□□□□ -1.01
TTC28-203ENST00000442232 ST8SIA3O43173 380 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 LY6G6CO95867 125 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 IGHV3-48P01763 117 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 ATF4P18848 351 aaPredicted RBP8.72□□□□□ -1.01
TTC28-203ENST00000442232 PPP5CP53041 499 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 RPL11P62913 178 aaKnown RBP8.72□□□□□ -1.01
TTC28-203ENST00000442232 SCGB2B2Q4G0G5 96 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 ZNF600Q6ZNG1 722 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 APRG1Q8IVJ8 170 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 RRNAD1Q96FB5 475 aaKnown RBP8.72□□□□□ -1.01
TTC28-203ENST00000442232 NARS2Q96I59 477 aaKnown RBP8.72□□□□□ -1.01
TTC28-203ENST00000442232 MAP6D1Q9H9H5 199 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 EXTL2Q9UBQ6 330 aa8.72□□□□□ -1.01
TTC28-203ENST00000442232 IGHV3OR16-13A0A075B7E8 117 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 IGHV3-74A0A0B4J1X5 117 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 C3orf85A0A1B0GTC6 90 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 MPTX1A8MV57 137 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 B3GALNT1O75752 331 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 CD3DP04234 171 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 ZNF182P17025 639 aaPredicted RBP8.71□□□□□ -1.02
TTC28-203ENST00000442232 PI3P19957 117 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 CEMP1Q6PRD7 247 aaPredicted RBP8.71□□□□□ -1.02
TTC28-203ENST00000442232 TCF24Q7RTU0 167 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 GBGT1Q8N5D6 347 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 GATAD1Q8WUU5 269 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
TTC28-203ENST00000442232 A0A1W2PS18 150 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 IGKV1-5P01602 117 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 OPRK1P41145 380 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 TAS2R19P59542 299 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 IZUMO4Q1ZYL8 232 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 TOMM20LQ6UXN7 152 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 OR52I2Q8NH67 350 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 TP53RKQ96S44 253 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 KLK11Q9UBX7 282 aa8.7□□□□□ -1.02
TTC28-203ENST00000442232 C14orf166Q9Y224 244 aaKnown RBP8.7□□□□□ -1.02
TTC28-203ENST00000442232 PUS1Q9Y606 427 aaKnown RBP eCLIP8.7□□□□□ -1.02
TTC28-203ENST00000442232 RPS10-NUDT3A0A1W2PQS6 291 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 INS-IGF2F8WCM5 200 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 RGS5O15539 181 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 DFFBO76075 338 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 RAB3DO95716 219 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 LHFPL1Q86WI0 220 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 TMEM229BQ8NBD8 167 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 TERB2Q8NHR7 220 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 ST8SIA2Q92186 375 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 METTL26Q96S19 204 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 RARRES2Q99969 163 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 MFFQ9GZY8 342 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 MTFP1Q9UDX5 166 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 RABAC1Q9UI14 185 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 HYDINQ4G0P3 5121 aa8.69□□□□□ -1.02
TTC28-203ENST00000442232 TRAV2A0A0B4J234 112 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 A0A0B4J293 547 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 IGHV3-66A0A0C4DH42 116 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 GABARAPO95166 117 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 CA1P00915 261 aaPredicted RBP8.68□□□□□ -1.02
TTC28-203ENST00000442232 NPPCP23582 126 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 EIF2B2P49770 351 aaKnown RBP8.68□□□□□ -1.02
TTC28-203ENST00000442232 MRPS10P82664 201 aaKnown RBP8.68□□□□□ -1.02
TTC28-203ENST00000442232 EWSR1Q01844 656 aaKnown RBP eCLIP8.68□□□□□ -1.02
TTC28-203ENST00000442232 MEF2DQ14814 521 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 ZNF124Q15973 351 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 GPR107Q5VW38 600 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms