RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 SELENOKQ9Y6D0 94 aa18.17■□□□□ 0.5
CPNE1-217ENST00000439669 MT-CO2P00403 227 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 GUCA2BQ16661 112 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 Q6ZRM9 215 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 UXS1Q8NBZ7 420 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 CHRDL1Q9BU40 450 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 ZNF436Q9C0F3 470 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-217ENST00000439669 GAR1Q9NY12 217 aaKnown RBP18.16■□□□□ 0.5
CPNE1-217ENST00000439669 PRR13Q9NZ81 148 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 CACNG5Q9UF02 275 aa18.16■□□□□ 0.5
CPNE1-217ENST00000439669 F8W735 103 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-217ENST00000439669 I3L2K1 104 aa18.15■□□□□ 0.5
CPNE1-217ENST00000439669 SBSPONQ8IVN8 264 aa18.15■□□□□ 0.5
CPNE1-217ENST00000439669 TMEM190Q8WZ59 177 aa18.15■□□□□ 0.5
CPNE1-217ENST00000439669 GALNT14Q96FL9 552 aa18.15■□□□□ 0.5
CPNE1-217ENST00000439669 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-217ENST00000439669 U3KQK5 164 aa18.15■□□□□ 0.5
CPNE1-217ENST00000439669 INS-IGF2F8WCM5 200 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 IGHV3-48P01763 117 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 MFAP4P55083 255 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 TMEM187Q14656 261 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 ZNF57Q68EA5 555 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-217ENST00000439669 TMED4Q7Z7H5 227 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 MARC2Q969Z3 335 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 GPR146Q96CH1 333 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 WDR89Q96FK6 387 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-217ENST00000439669 SRRQ9GZT4 340 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 MLXQ9UH92 298 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 TMEM56-RWDD3S4R434 201 aa18.14■□□□□ 0.49
CPNE1-217ENST00000439669 NUPL2O15504 423 aaKnown RBP18.13■□□□□ 0.49
CPNE1-217ENST00000439669 ADMP35318 185 aa18.13■□□□□ 0.49
CPNE1-217ENST00000439669 SUB1P53999 127 aaKnown RBP eCLIP18.13■□□□□ 0.49
CPNE1-217ENST00000439669 ELLP55199 621 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-217ENST00000439669 CD81P60033 236 aa18.13■□□□□ 0.49
CPNE1-217ENST00000439669 SPCS3P61009 180 aa18.13■□□□□ 0.49
CPNE1-217ENST00000439669 BTNL8Q6UX41 500 aa18.13■□□□□ 0.49
CPNE1-217ENST00000439669 IL22RA2Q969J5 263 aa18.13■□□□□ 0.49
CPNE1-217ENST00000439669 C20orf24Q9BUV8 137 aa18.13■□□□□ 0.49
CPNE1-217ENST00000439669 ZNF785A8K8V0 405 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 NDUFA4O00483 81 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 ANXA3P12429 323 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 INPP1P49441 399 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 TMEM61Q8N0U2 210 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 DEDD2Q8WXF8 326 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 TXN2Q99757 166 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 MRPL27Q9P0M9 148 aaKnown RBP18.12■□□□□ 0.49
CPNE1-217ENST00000439669 DNAH9Q9NYC9 4486 aa18.12■□□□□ 0.49
CPNE1-217ENST00000439669 IGHV3OR16-8A0A075B7F1 116 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 GNG7O60262 68 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 CTSGP08311 255 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 RNASE2P10153 161 aaKnown RBP18.11■□□□□ 0.49
CPNE1-217ENST00000439669 SUPT4H1P63272 117 aaKnown RBP18.11■□□□□ 0.49
CPNE1-217ENST00000439669 TRIQKQ629K1 86 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 OR52E5Q8NH55 327 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 NEURL2Q9BR09 285 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 TUBA4BQ9H853 241 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 DAZ1Q9NQZ3 744 aaKnown RBP18.11■□□□□ 0.49
CPNE1-217ENST00000439669 C19orf73Q9NVV2 129 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 NDUFA13Q9P0J0 144 aa18.11■□□□□ 0.49
CPNE1-217ENST00000439669 A8MZ25 164 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 CORTO00230 105 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 SCAF4O95104 1147 aaKnown RBP18.1■□□□□ 0.49
CPNE1-217ENST00000439669 NXPH3O95157 252 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 C8orf88P0DMB2 117 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 FCGR2BP31994 310 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-217ENST00000439669 SRPXP78539 464 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 RELQ04864 619 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-217ENST00000439669 AARDQ4LEZ3 155 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 LGI3Q8N145 548 aa18.1■□□□□ 0.49
CPNE1-217ENST00000439669 SLC25A21Q9BQT8 299 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-217ENST00000439669 CEBPZOSA8MTT3 80 aa18.09■□□□□ 0.49
CPNE1-217ENST00000439669 ZNF207O43670 478 aaKnown RBP18.09■□□□□ 0.49
CPNE1-217ENST00000439669 CD7P09564 240 aa18.09■□□□□ 0.49
CPNE1-217ENST00000439669 SULT1A3P0DMM9 295 aa18.09■□□□□ 0.49
CPNE1-217ENST00000439669 SULT1A4P0DMN0 295 aa18.09■□□□□ 0.49
CPNE1-217ENST00000439669 DUSP18Q8NEJ0 188 aa18.09■□□□□ 0.49
CPNE1-217ENST00000439669 A0A0B4J2A0 478 aa18.08■□□□□ 0.48
CPNE1-217ENST00000439669 YIF1AO95070 293 aa18.08■□□□□ 0.48
CPNE1-217ENST00000439669 NPBWR1P48145 328 aa18.08■□□□□ 0.48
CPNE1-217ENST00000439669 WWC2-AS2Q96NR7 200 aa18.08■□□□□ 0.48
CPNE1-217ENST00000439669 HEYLQ9NQ87 328 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-217ENST00000439669 SHPKQ9UHJ6 478 aa18.08■□□□□ 0.48
CPNE1-217ENST00000439669 VAMP1P23763 118 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 OPRK1P41145 380 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 BAK1Q16611 211 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 TMEM128Q5BJH2 165 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 PVRIGQ6DKI7 326 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 RBPMS2Q6ZRY4 209 aaKnown RBP18.07■□□□□ 0.48
CPNE1-217ENST00000439669 LYZL2Q7Z4W2 148 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 ZMAT4Q9H898 229 aa18.07■□□□□ 0.48
CPNE1-217ENST00000439669 HTR2BP41595 481 aa18.06■□□□□ 0.48
CPNE1-217ENST00000439669 NMSQ5H8A3 153 aa18.06■□□□□ 0.48
CPNE1-217ENST00000439669 SLC16A13Q7RTY0 426 aa18.06■□□□□ 0.48
CPNE1-217ENST00000439669 RCHY1Q96PM5 261 aa18.06■□□□□ 0.48
CPNE1-217ENST00000439669 CACFD1Q9UGQ2 172 aa18.06■□□□□ 0.48
CPNE1-217ENST00000439669 COL7A1Q02388 2944 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 TRAV25A0A0B4J276 109 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 PIGBOS1A0A0B4J2F0 54 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 LINC00854A0A1B0GVQ3 168 aa18.05■□□□□ 0.48
CPNE1-217ENST00000439669 C15orf62A8K5M9 175 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms